Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01113 ATGAAGAACTCCGACGTCTCCGCTCACTTTGAATCGCCTCACTCCCCTCTCCGCTTCCGATCCTCCCCGCTCTCCGACAACGGCGACCCCTTCCACTCTCCCGAAAACTCGCCGCTAAATGACCACCGAGACAACTCCAGGGCCATCGTCATCGTCGAGACTTCCACGCAGTTCGCCCAGGCCGCTCCCCCCGTTACGGAGTCTGAGCACCACAACCCTCCGCCCAATGAGCCGCCGGAGGTCGTGGTCACCCGTCCCGCGCGCCCGGAGAGTCGCTCGCCGGGCGCCGGCACCCGAGGGCGAACCAGGGCGGCGCCGCCCCCTACTCTTGCTGTGCCGAAAAGAGAGGCGATGCTGAAAAAGGTGGCGTTAGGGTTCCGGTTGAGCGAGGTGGTGCTGTGTCTGATTTCGTTTTCCGTTATGGCGGCGGACAAGACTCGTGGTTGGAGCGGCGACTCTTTTGATCGCTACAAGGAATACAGGTATTGTTTATCGGTGAATGTTATCGCATTTGTATACGCTGCGTTCCAGACGTGTGATCTGGCATATCAAGTAGTAGCAGGCAGAAGCATAATCAGTCACCACCTGCGTTACCACTTTGATTTCTTCATGGATCAGGCAAGTCTCAAAATAGTTCTGGCGTATCTTCTGATATCGTCTGCATCATCTGCAGCCACACGCATTGATGACTGGCAATCCAATTGGGGAAAAGATGAGTTCACTGAGATGGCTAGTGCCTCAGTTGCGTTGGCCTTTCTTGCTTTTTTTGCCTTTGCTATTAGTTCCTTAATCTCTGGCTACAACCTCTGTACTCTCTTCTCCTAG 825 0.5515 MKNSDVSAHFESPHSPLRFRSSPLSDNGDPFHSPENSPLNDHRDNSRAIVIVETSTQFAQAAPPVTESEHHNPPPNEPPEVVVTRPARPESRSPGAGTRGRTRAAPPPTLAVPKREAMLKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVYAAFQTCDLAYQVVAGRSIISHHLRYHFDFFMDQASLKIVLAYLLISSASSAATRIDDWQSNWGKDEFTEMASASVALAFLAFFAFAISSLISGYNLCTLFS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01113 274 MobiDBLite consensus disorder prediction 1 109 - -
Lapu3g01113 274 Pfam Casparian strip membrane protein domain 118 257 IPR006702 -
Lapu3g01113 274 MobiDBLite consensus disorder prediction 49 63 - -
Lapu3g01113 274 MobiDBLite consensus disorder prediction 18 34 - -
Lapu3g01113 274 PANTHER CASP-LIKE PROTEIN 4A4 92 270 - -
Lapu3g01113 274 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01113 Lapu-Chr3 12015350 12016555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01113 - - gmx:100812568 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01113 3 12015350 12016555 Lapu9g00737 9 9743863 9745282 ECH
Lapu3g01113 3 12015350 12016555 Lapu3g01113 3 12015350 12016555 ECH
Lapu3g01113 3 12015350 12016555 Lapu9g00737 9 9743863 9745282 PCT