Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01104 ATGCGATCCTCAACTATTCGATGCTTCACCGTCATCACCCTCTTACTTCTCCTTTTGCAGGGACACGCAACCCCCCATAAACTTCTCTCTTCTCCTTTTTCAACCGCTCTCGAAACCCTCCAGAAACAACTCGGCTACACCTTCAAGAGCATTGATCTTCTCCGTCGCGCCATGACCCACGCCTCCTTCTCCGAAGAAAACAACAAAGCTTTCGCCATTCTGGGCGCCTCCGTCATCGAAACCTCCGTCTCTTTCCATTTACTCTCCAAAGACGTTGATATTTCTCCCAAAGAGTTGAACCGTCGATTGTCCCAAATGACCAACGTCGACTCTTCCTGCGCCGTCGACGGAACTCGATTAGGGTTGCACAAGATCGTTCGCGTCTCGCCCAAGACCAATTCATCCGCCCCCGCCGTCGTTTGTGGCGCGTTCCGAGCGATCTTTGCTGCCATTTCTATTGACACCGGCAAGTCCGATGATGCAGGTAACGTTTTCTGGAACCTTCATGGCGGTGACCTAGGAGCTCCGTGGCTCTTTGAACTGTGA 546 0.522 MRSSTIRCFTVITLLLLLLQGHATPHKLLSSPFSTALETLQKQLGYTFKSIDLLRRAMTHASFSEENNKAFAILGASVIETSVSFHLLSKDVDISPKELNRRLSQMTNVDSSCAVDGTRLGLHKIVRVSPKTNSSAPAVVCGAFRAIFAAISIDTGKSDDAGNVFWNLHGGDLGAPWLFEL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01104 181 PANTHER RIBONUCLEASE III 30 156 IPR011907 GO:0003723|GO:0004525|GO:0006364
Lapu3g01104 181 SUPERFAMILY RNase III domain-like 31 165 IPR036389 GO:0004525|GO:0006396
Lapu3g01104 181 Pfam Ribonuclease-III-like 52 158 IPR000999 GO:0004525|GO:0006396
Lapu3g01104 181 Gene3D Ribonuclease III domain 35 171 IPR036389 GO:0004525|GO:0006396
Lapu3g01104 181 ProSiteProfiles Ribonuclease III family domain profile. 37 156 IPR000999 GO:0004525|GO:0006396
Lapu3g01104 181 SMART riboneu5 52 178 IPR000999 GO:0004525|GO:0006396
Lapu3g01104 181 CDD RIBOc 52 159 IPR000999 GO:0004525|GO:0006396
Lapu3g01104 181 FunFam Protein NUCLEAR FUSION DEFECTIVE 2 35 171 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01104 - - gmx:100527745 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01104 3 11866589 11869569 Lapu3g01104 3 11866589 11869569 ECH