Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01096 ATGGCAGGAGGCGGGGGAGCTCCGGCGCCTAAGATTGATGAGCCACAGCCACATCCACCGAAGGATCAGCTACCGAATGTTTCGTACTGCATTACGAGTCCTCCTCCATGGCCCGAGGCCATACTTCTTGGGTTTCAACATTATCTTGTGATGCTCGGTACAACTGTGCTAATTCCCACTGCTCTTGTTCCCCAGATGGGAGGTGGCAATGAGGAGAAGGCAAAAGTTATTCAAACTCTACTCTTTGTGGCTGGAATTAACACATTGCTCCAAACTCTGTTTGGAACTCGATTGCCTGCAGTAATTGGAGGGTCTTATACTTATGTTGCAACAACCATCTCTATTATTCTTGCTGGTCGATTCAGTGATGAGCCAGATCCTATAGAGAAATTCAAGAGGATAATGCGGGCGACCCAAGGTGCTCTAATTGTAGCTTCAACTCTTCAAATAGTACTAGGCTTTAGTGGTCTTTGGCGCAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTTTATGAGCTAGGCTTTCCTGGGGTTGCTAAATGTGTAGAGATTGGACTGCCGGAGCTCATATTGCTAGTATTTGTTTCACAGTTTGTACCCCATGTTCTACATGCAGGAAAACATGTCTTTGAACGGTTCACTGTTTTATTTACTGTTGCAATTGTGTGGCTATATGCTTATCTGCTCACTGTTGGAGGGGCATACAATCATGCTGCACCTAAAACACAGGCAACCTGCCGTACTGACCGTGCTGGTTTAATAGAAGCTGCCCCATGGATACGAGTTCCATATCCATTTCAATGGGGAGCCCCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTTGTAGAGTCCAGTGGTGCTTTTATTGCTGTCTATCGGTACGCAAGTGCAACACCATTACCACCATCAATTCTTAGTCGCGGCATTGGCTGGCAGGGAGTTGCCATTTTATTATCAGGATTGTTTGGAACGGGCAATGGATCCTCTGTATCTGTGGAAAACGCAGGTCTTTTGGCTTTAACACGAGTAGGCAGCCGAAGAGTGGTGCAGATATCGGCTGGTTTTATGATTTTCTTTTCAATACTTGGTAAATTTGGAGCTGTTTTTGCATCCATTCCACCTACTATTGTTGCTGCACTGTACTGCTTGTTCTTCGCTTATGTTGGAGCGGGAGGCCTAAGTTTTCTTCAATTCTGCAACCTCAATAGTTTTAGAACAAAGTTTGTATTGGGCTTCTCCATCTTCATTGGCCTGTCTGTGTCACAGTACTTCAATGAGTACACAGCAATTAATGGTTATGGTCCAGTTCACACCAAAGCAAGATGGTTCAATGATATAATCAATGTCCCGTTCCAATCAAAAGCGTTTGTTGCGGGTTGCATGGCGTATTTCCTTGATAACACAATACATAAGAAGGATGGTGCCATTCGGAAAGACAGAGGCAAACATTGGTGGGACAAGTACCGCTCCTTCAAGACTGACACAAGAAGTGAGGAGTTTTATTCATTGCCTTTCAACCTAAACAAATACTTCCCATCTGTGTAA 1602 0.4463 MAGGGGAPAPKIDEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTYVATTISIILAGRFSDEPDPIEKFKRIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFVSQFVPHVLHAGKHVFERFTVLFTVAIVWLYAYLLTVGGAYNHAAPKTQATCRTDRAGLIEAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPLPPSILSRGIGWQGVAILLSGLFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPTIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFVLGFSIFIGLSVSQYFNEYTAINGYGPVHTKARWFNDIINVPFQSKAFVAGCMAYFLDNTIHKKDGAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01096 533 Pfam Permease family 39 443 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lapu3g01096 533 MobiDBLite consensus disorder prediction 1 27 - -
Lapu3g01096 533 NCBIfam purine/pyrimidine permease 41 440 - -
Lapu3g01096 533 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01096 Lapu-Chr3 11779191 11785408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01096 9 533 Organic Solute Cotransporters AT5G49990 80.989 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01096 - - gmx:100791553 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01096 3 11779191 11785408 Lapu9g00753 9 10177492 10184941 PCT