Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01090 ATGGAAAAGAAGCGGAAGAGGAAGCAGCAGGTGCAGCGCGCTGAAGATCGAAAGCCGAAACCGGTTCGTGCCGGTTCAACCGGAACCGTCAATGTGAAAGATCCATTCCCATCCCACGCTCGACCCACCCCGCAAGAATGCGAAGCCGTACGAGACACTCTCTTAGCCCTACACGGCATTCCCCCGGAACTCGCCAAGTACCGGAAACTCCAACCACTCAATCACGCGGTCCAACCGGAGCCACCCGAGCCCGTTCTCGACGGTTTGGTCCGAACTGTCCTCTCGCAGAACACCACTGAGGTCAATTCCCAAAAGGCCTTTGCTTCTCTCAAATCCTCCTTCCCCACTTGGGAACATGTTTTCGGTGCCGAGTCCAAGGACGTGGAGAATGCCATTCGATGCGGTGGTCTTGCCCCGACTAAGGCTTCCTGCATTAAGAACGTGCTGCGTTGTTTGCGCGAGAGAAGAGGTCAATTGTGTTTGGAGTATTTGCGTGATTTGTCTGTCGATGAAGTTAAGGCGGAGCTGTCCCTTTTCAAAGGAATTGGTCCCAAAACAGTGGCGTGTGTGTTAATGTTCAATCTTCAGCAAGATGATTTTCCAGTGGACACTCACATATTTGAGATTGCAAAAACCATGGGTTGGGTACCAGCTGTTGCAGACAGAAATAAGTCGTATCTTCATCTAAACCAAAGGATACCAAATGAACTTAAGTTTGACCTAAATTGCCTTATGTTTACGCACGGAAAACTTTGCCGCAAATGCTCCAGTAAAAAGGGTAACCAGCAAGGAAAGAAAGGTGACGATAAGTCCTGTCCTTTACTGAATTATTGTAAAGACTCAGATTGA 849 0.4912 MEKKRKRKQQVQRAEDRKPKPVRAGSTGTVNVKDPFPSHARPTPQECEAVRDTLLALHGIPPELAKYRKLQPLNHAVQPEPPEPVLDGLVRTVLSQNTTEVNSQKAFASLKSSFPTWEHVFGAESKDVENAIRCGGLAPTKASCIKNVLRCLRERRGQLCLEYLRDLSVDEVKAELSLFKGIGPKTVACVLMFNLQQDDFPVDTHIFEIAKTMGWVPAVADRNKSYLHLNQRIPNELKFDLNCLMFTHGKLCRKCSSKKGNQQGKKGDDKSCPLLNYCKDSD* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01090 282 MobiDBLite consensus disorder prediction 1 43 - -
Lapu3g01090 282 MobiDBLite consensus disorder prediction 7 22 - -
Lapu3g01090 282 CDD ENDO3c 89 249 IPR003265 GO:0006284
Lapu3g01090 282 Gene3D - 202 256 IPR023170 -
Lapu3g01090 282 SUPERFAMILY DNA-glycosylase 54 279 IPR011257 GO:0003824|GO:0006281
Lapu3g01090 282 PANTHER - 4 280 - -
Lapu3g01090 282 Pfam HhH-GPD superfamily base excision DNA repair protein 90 231 IPR003265 GO:0006284
Lapu3g01090 282 SMART endo3end 94 251 IPR003265 GO:0006284
Lapu3g01090 282 Gene3D Hypothetical protein; domain 2 84 201 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01090 K10773 - gmx:100802952 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01090 3 11712107 11714609 Lapu3g01090 3 11712107 11714609 ECH