Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01053 ATGAGCACCAGTCCAGGGATATATTTTGATATTGGCAAGAAGGCTAAAGATGTTCTGCACAAGGACTATTCACATCTGTCACCAATTCACTTTCACTACCAATTCATGGACTATAACGTAGACCTCTCTTGTCAATTAAATGAAATTCTGCCTGGATTCAGGAGCCTTTTCAAATGCACCATACCTGATTCTGGGAAGGTAGAACTACAACACTTGACTAACTACACTGGAATTACTGGATGCATTGGACTCGAAGGAAACGTAGAAAAAGGATATGACCCTGTTCTAAACTTGTCGGGTCTTGTGGGAACAAACATCTTGTCCCTTGGAGCCAATGTTGCTTTAGACATACCAACAAGAACATTCAGTAATCTGAATGCTGGATTAGGCCTCAACACTCCCTTCCTTGTTGCTTCCTTGACCATGCATGACAGTTTTGACATTCTGAAAGCCTCCTGTTATCATGAAGTGAGCCCCCTAAGCAAGACTGCCATTGCAGCAGAGCTGAAGCATAGCTTGTCAATGGGGGAGACTAGTGCCACCGTTGGTGCTCAGCATGCATTTTTTCCGCATACGTTAGTAAAGGCTCGATTTGACACCTTTGGCAAGGCAGGTGCTGTTATTCAACAAGGGTTCTGGGAGAGATTTTTTGTGTCTATGGCTGGAGAAGTGGAGTTTAATACCACAGATAATAATTTGCATCCCAAGGTTGGAGTCTCTGTGGCTTTAAGACCCTAG 738 0.4363 MSTSPGIYFDIGKKAKDVLHKDYSHLSPIHFHYQFMDYNVDLSCQLNEILPGFRSLFKCTIPDSGKVELQHLTNYTGITGCIGLEGNVEKGYDPVLNLSGLVGTNILSLGANVALDIPTRTFSNLNAGLGLNTPFLVASLTMHDSFDILKASCYHEVSPLSKTAIAAELKHSLSMGETSATVGAQHAFFPHTLVKARFDTFGKAGAVIQQGFWERFFVSMAGEVEFNTTDNNLHPKVGVSVALRP* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01053 245 Gene3D Porin 3 244 IPR023614 -
Lapu3g01053 245 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 40 245 IPR001925 GO:0005741|GO:0008308|GO:0098656
Lapu3g01053 245 Pfam Eukaryotic porin 37 238 IPR027246 GO:0005741|GO:0055085
Lapu3g01053 245 FunFam Mitochondrial outer membrane protein porin 1 isoform A 2 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01053 Lapu-Chr3 11271420 11273727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01053 K15040 - gmx:100787061 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01371 1 26489805 26494767 Lapu3g01053 3 11271420 11273727 ECH
Lapu3g01053 3 11271420 11273727 Lapu3g01053 3 11271420 11273727 ECH