Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01052 ATGACGACGCCGTTTCAGCAACCCCCCCAAATAGTACGGAGACTGGTGGTAGAAGTGGTCGACGCGCGCAATCTGCTCCCCAAGGATGGCCAAGGTAGCTCCAGCCCTTACGTCGTGGCGGACTTCGACGGCCAGAGGAAGCGAACCACCACCCGGTTCAAAGAGCTCAACCCGGTCTGGAACGAGCCTCTCGAGTTTATTGTGTCCGACCCGGATATTATGGACTTTGAGGAGCTCGAAGTTGAGGTCTACAACGACAAGAAGTTTGGGAACGGTAGCGGACGGAAGAACCACTTTCTCGGGAGGGTCAAACTGTATGGAACTCAGTTTTCCAGAAGAGGTGAAGAGGCTCTTGTTTACTACACGCTGGAAAAGAGGAGCGTCTTCAGTTGGATAAGGGGAGAAATTGGCCTCAGGATTTACTACTACGATGAAATGCTTATTGAAGAGGAAAAACCGCCGCCGCCGGAGCAGCAGCAGGAGGAGGAGCAGGGTGAGAGACCGGAGCAAGAGCGGAACAGGCCGCCGCCGGGAATGGTTGTGGTTGAGGAGGGACGAGTTTTCGAGGCGCCTGGAGCGATGGAGCAATGCGTGCCTCTTCCTACTGGTCTTCCTCATTCGCCGCGCGTTGTGGTTGTGGAGGAATCGCCGCCACCGGTGGTTCATGTTCCGCAGGATCCTCCGTTGCCGGAAATGTATGAGCCTCCGGTGTCGGAAATGCAGTTCCATCCGGAAGTGAGGAAAATGCAGGCCAACAGAGGCGAGAGGGTAAAGATTTTGAAGCGGCCGAACGGGGATTACTCACCTAAAGATATTTCAGCAAAGAAGACGGGAAATGAGTCCGAGAGGGTTCATCCCTTCGATCTGGTGGAGCCAATGCAGTATCTGTTTGTCAAAATCGTGAAAGCGCGAGAGATTGCTCCTCCCAGTGAAGGCCCATTCGTGAAGGTTCGGACGTCGAGCCACACCATGAGAACGAAGCCAGCGAGTTACCGGCCCAACGAGCCCACTAGTTCGCCGGAATGGAACCAGGTGTTTGCGCTGGGTTACAACAAGACCGACGCTAACAGCGCCACCCTGGAGATTTCCGTCTGGGATTCCTCGACATATAACTTTCTTGGTGGTGTTTGCTTCGACCTTTCCGATGTTCCAGTGAGAGATCCTCCCGACAGTCCCTTGGCGCCGCAATGGTACCGTCTTGAAGGAGGAACAGCCGATCAAAATTCCGGCATAGTTTCCGGCGACATTCAGCTCTCTGTTTGGATTGGAACGCAATCCGACGAAGCGTTCCCAGAAGCGTGGATCTCGGATGCACCCTGTGTTGCACATACTCGATCCAAGGTTTATCAATCGCCAAAGCTCTGGTACCTTCGCGTGACGGTAGTGGAAGCACAAGACCTGAACATTGCGCCGAATCTACCTCCACTAACAGCGCCGGAAGTGAGGGTGAACGTGCAACTAGGGTTCCAATCGCAGAGAACAAGGCGAGGATCAATGAACCACAGAAGCTTATCATTCCACTGGAATGAGGACCTTCTCTTTGTGGCCGGGGAGCCTCTGGAAGATTCTGTCATCGTTCTGTTAGAAGATCGTACTAGCAAGGAGGTGGCTCTCCTAGGCCACATCGTAGTTCCGCTGAGCTCCATTGAGCAACGAATCGACGAGCGCCACGTGGCGGCGAAATGGTTCCCGTTAGAAGGTGGGCCCTACTGCGGGCGAGTCTTCCTGCGTCTCTGCCTGGAGGGCGGGTATCACGTCCTGGACGAAGCGGCGCACGTGTGCAGCGATTTCCGTCCCACGGCGAAGCAGCTATGGAAACCGGCGGTGGGTATCCTAGAATTGGGGATTCTGGGTGCACGCGGGCTCCTACCGATGAAATCAAAAGGCGGTGGAAAAGGCTCCATCGATGCGTACTGTGTGGCCAAGTATGGGAAAAAGTGGGTCCGAACCCGCACCGTAACCGACAGCTTCGATCCACGCTGGAACGAGCAGTACACGTGGCAGGTTTACGACCCGTGTACGGTGCTCACGGTTGGAGTGTTCGACAACTGGCGAATGTTTGCTGACGTGCCAGATGAGAGGCCCGATTGCCGTATCGGAAAGGTCCGCATACGCGTATCTACGCTTGAGAGCAACAGAGTGTACACCAATTCGTACCCCCTCCTAGTGCTCACGCGAACCGGGTTGAAGAAAATGGGGGAGATCGAGTTAGCTGTTCGTTTCGCCTGTCCCTCCTTGTTGCCCGATACGTGTGCAGTATATGGACAGCCATTGCTTCCAAGGATGCACTATCTCCGGCCACTAGGGGTGGCGCAGCAGGAGGCGCTGCGTGGGGCCGCGACAAAGATGGTGGCGCAGTGGCTGGCCAGGTCAGAGCCAGCGCTGGGGCACGAGGTAGTTCGGTACATGTTGGATGCAGACTCGCACGTGTGGAGCATGAGAAAGAGCAAGGCGAATTGGTTAAGAATCGTGGCGGTTTTGGCTTGGGCCGTTGGTTTGGCGAAATGGTTGGATGATATAAGAAGGTGGAAGAACCCTGTTACGACGGTGCTGCTCCACATTCTGTATTTAGTGCTTGTTTGGTATCCGGATTTGATTGTCCCCACAGGCTTCTTATACGTGGTCTTAATTGGGATATGGTATTACCGTTTCAGGCCGAAAATACCGGCTGGGATGGATACCCGGTTGTCTCAGGCTGAAGCGGTTGACCCGGATGAGTTGGACGAGGAATTTGACACCATGCCAAGTTCCAAACCACCCGATATAATCCGAATGCGCTATGATAGGTTAAGAATGCTAGCAGCTCGTGTCCAAACGGTGTTGGGTGATTTTGCCACCCAAGGAGAGAGGTTTCAAGCCTTGGTTAGTTGGAGAGATCCCAGGGCTACCAAGTTGTTCATTGGAGTATGCCTTGCTATAACTGTCACACTCTATGCAATGCCGCCAAAAATGGTGGCCGTCGCCTTAGGCTTTTATTACCTCCGCCACCCCATGTTCCGGAATCCTATGCCCTCCGCAACTTTAAACTTTTTCCGGCGACTTCCCAGCCTCTCCGATCGCTTGATGTAG 3069 0.5432 MTTPFQQPPQIVRRLVVEVVDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELNPVWNEPLEFIVSDPDIMDFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSRRGEEALVYYTLEKRSVFSWIRGEIGLRIYYYDEMLIEEEKPPPPEQQQEEEQGERPEQERNRPPPGMVVVEEGRVFEAPGAMEQCVPLPTGLPHSPRVVVVEESPPPVVHVPQDPPLPEMYEPPVSEMQFHPEVRKMQANRGERVKILKRPNGDYSPKDISAKKTGNESERVHPFDLVEPMQYLFVKIVKAREIAPPSEGPFVKVRTSSHTMRTKPASYRPNEPTSSPEWNQVFALGYNKTDANSATLEISVWDSSTYNFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGTADQNSGIVSGDIQLSVWIGTQSDEAFPEAWISDAPCVAHTRSKVYQSPKLWYLRVTVVEAQDLNIAPNLPPLTAPEVRVNVQLGFQSQRTRRGSMNHRSLSFHWNEDLLFVAGEPLEDSVIVLLEDRTSKEVALLGHIVVPLSSIEQRIDERHVAAKWFPLEGGPYCGRVFLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAVGILELGILGARGLLPMKSKGGGKGSIDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVPDERPDCRIGKVRIRVSTLESNRVYTNSYPLLVLTRTGLKKMGEIELAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPALGHEVVRYMLDADSHVWSMRKSKANWLRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDIIRMRYDRLRMLAARVQTVLGDFATQGERFQALVSWRDPRATKLFIGVCLAITVTLYAMPPKMVAVALGFYYLRHPMFRNPMPSATLNFFRRLPSLSDRLM* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01052 1022 MobiDBLite consensus disorder prediction 316 338 - -
Lapu3g01052 1022 Pfam C2 domain 295 398 IPR000008 -
Lapu3g01052 1022 Pfam C2 domain 14 106 IPR000008 -
Lapu3g01052 1022 Pfam C2 domain 455 565 IPR000008 -
Lapu3g01052 1022 Pfam C2 domain 610 721 IPR000008 -
Lapu3g01052 1022 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 295 439 IPR035892 -
Lapu3g01052 1022 ProSiteProfiles C2 domain profile. 276 398 IPR000008 -
Lapu3g01052 1022 Gene3D C2 domain 291 434 IPR035892 -
Lapu3g01052 1022 Gene3D C2 domain 12 175 IPR035892 -
Lapu3g01052 1022 CDD C2C_MCTP_PRT_plant 456 599 IPR047258 -
Lapu3g01052 1022 Gene3D C2 domain 608 744 IPR035892 -
Lapu3g01052 1022 MobiDBLite consensus disorder prediction 313 338 - -
Lapu3g01052 1022 ProSiteProfiles C2 domain profile. 593 719 IPR000008 -
Lapu3g01052 1022 SMART C2_3c 611 718 IPR000008 -
Lapu3g01052 1022 SMART C2_3c 14 119 IPR000008 -
Lapu3g01052 1022 SMART C2_3c 456 558 IPR000008 -
Lapu3g01052 1022 SMART C2_3c 295 392 IPR000008 -
Lapu3g01052 1022 Pfam Plant phosphoribosyltransferase C-terminal 867 1022 IPR013583 -
Lapu3g01052 1022 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Lapu3g01052 1022 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 15 1022 IPR047259 -
Lapu3g01052 1022 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 158 IPR035892 -
Lapu3g01052 1022 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 610 762 IPR035892 -
Lapu3g01052 1022 ProSiteProfiles C2 domain profile. 435 563 IPR000008 -
Lapu3g01052 1022 MobiDBLite consensus disorder prediction 261 280 - -
Lapu3g01052 1022 CDD C2A_MCTP_PRT_plant 14 144 - -
Lapu3g01052 1022 FunFam C2 domain-containing protein 277 422 - -
Lapu3g01052 1022 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 455 601 IPR035892 -
Lapu3g01052 1022 Gene3D C2 domain 440 582 IPR035892 -
Lapu3g01052 1022 MobiDBLite consensus disorder prediction 152 173 - -
Lapu3g01052 1022 MobiDBLite consensus disorder prediction 152 179 - -
Lapu3g01052 1022 FunFam C2 domain-containing protein 593 745 - -
Lapu3g01052 1022 CDD C2D_MCTP_PRT_plant 611 738 IPR047255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01052 Lapu-Chr3 11260289 11264564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01052 2 1022 Lipid Metabolism Gene Families AT1G74720 70.929 0.0 1540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01052 - - gmx:100783882 1887.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01052 3 11260289 11264564 Lapu3g01052 3 11260289 11264564 ECH