Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01050 ATGGACCATCGGGAATGGCGTCCGAGTCCTCCCCCCAATCTCTGCCCCACTTGCTCCGTCCCCCACTTCCCCTTCTGCCCCGCTCCTCCTCCCCCACCCTATCACCCCCGCCCATTTCCACCCGATCACACTCACCACCCCCCTCTCCCTTACGCCCCCGCCAACCCTAATTTCCCAAACTTCAAGAGACCCCGAATCCACGAAGACAACAACAACCCTCTCAATTTCTCCGACGACCAGCGCAGATTACAGCTCATTCGCGATCACGGAACCAACCCCTCTCTCCCCCACACTCACGCGCCACACCAATCACAGCACACTCAAAACGCCTTCCCTCCACACGACACCGTTCCGCCGCACCACCTTCACAATGCCCAATTCAGATCTTCCCCGCACCCCTTCCACCCTTATCCAGACCCCTCGCAACGCCTTCCGGACGTTTCCCCCGCCTCTTACCATCACTCTCACGCTCCTCACGTTGGCATGCAGCCACCATCGCCTCATGTTAATTTCCCGTCTCACGAAGGGAACCACCAGAATCAACACAAGCTGAATGGAAGAGCTGGTCACTATCCTTACCCGTACCCTGTGGGTAACAATAGCAACGGTTCTTGTGATAATAACATGGAAGCTTCTAGATTTTTCAGGGGTCACCCTCAGCCTCCTCTTCCTTCTTCGCCGCCGCCACCTCTTCCTATGGAACCATCCATGAATCAATTGAAAACGTACTTTTCACCGCCCAAGAAACCGGCTTCTCTTTTCCCCGTTCACTTGAGCTCATCTCCTTCGTCGTACTCGCAAGTTCCCGAACCACATTCTTTACCTCAGCCCTATTACCCCACTGGCTTTCCTTCCGAAGAACCGTCGAAGCAGTACTTGGGAGATTCCCAACCTTTTTCGTTAAACCAGTTTTCTGCTGACAGACCTAAATTTATCGATGCTTCACATTTATTTCGGCATCCTCATCGGGCTTCGCGGCCTGATCATTTTGTGATAATCTTTCGGGGCCTTCCAGGTAGTGGTAAGAGTTACCTGGCAAAGATGCTGCGTGATCTTGAGGTTGAAAATGGCGGTGATGCTCCTCGAATTCATTCTATGGACGATTATTTTATGACTGAGGTCGAAAAGGTTGAGGATAGTGAGGGATCAAAATCTTCAAGTTCAGGTAGAAACAAGAAGCCTGTGACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCTTTCAAGAAAACTGTTGAGGAAGGAGTTTTCACCTTCATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGCTACGAAGTTTATATTTTAGAAGCTACATACAAGGACCCAGTGGGTTGTGCTGCTAGGAATGTCCATGGATTTACACAGGAAGACATAGAAAAGATGTCTAAGCAATGGGAAGAAGCTCCGTCCTTGTATCTGCAGCTTGATGTGAAGTCATTATTTCATGGAGATGATCTAAAGGAAAGCAGGATAATGGAGGTTGACATGGATATGGAAGATGATCTTGGTGATGTATTACCTCCAGTTCAAGGAAGAGAAGCTGAGAAAGTTGTTGACTCTACTGTTGGGGAAGATGCAAGTTTCCTGAAAAAGGCTGGAAAGCACTGGGATGCTGAAGGGGAACATCCAACAGAAGTCAGGGAATTGGGTAAAAGCAAATGGTCAGAGGATCTCGGTGAAGATGACATTGGTCAAACTGAAGGTATGAAGAGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATCAGGGTGGCAAGACAGGGTTTTCAATAGGGGCTGCAAGGAAGGTAAATGCTTTGTCTATAGTGATCGGACCTGGTGCTGGATACAACCTGAAATCTAATCCGTTACCTGAAGAAGATAGTCCAAGCCGTAATAGTGTGGAATCAAAAAAGCATAGCATATTTCAAGAACGAATTCGGGCAGAACGAGAATCCTTCAAAGCTGTTTTTGATAGGAGACGGCACAGGATTGGCGGACTTGATGTGGAGGAGGACTAA 2115 0.4827 MDHREWRPSPPPNLCPTCSVPHFPFCPAPPPPPYHPRPFPPDHTHHPPLPYAPANPNFPNFKRPRIHEDNNNPLNFSDDQRRLQLIRDHGTNPSLPHTHAPHQSQHTQNAFPPHDTVPPHHLHNAQFRSSPHPFHPYPDPSQRLPDVSPASYHHSHAPHVGMQPPSPHVNFPSHEGNHQNQHKLNGRAGHYPYPYPVGNNSNGSCDNNMEASRFFRGHPQPPLPSSPPPPLPMEPSMNQLKTYFSPPKKPASLFPVHLSSSPSSYSQVPEPHSLPQPYYPTGFPSEEPSKQYLGDSQPFSLNQFSADRPKFIDASHLFRHPHRASRPDHFVIIFRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDSEGSKSSSSGRNKKPVTKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQWEEAPSLYLQLDVKSLFHGDDLKESRIMEVDMDMEDDLGDVLPPVQGREAEKVVDSTVGEDASFLKKAGKHWDAEGEHPTEVRELGKSKWSEDLGEDDIGQTEGMKSNINALSGLIHQYGKERKSVHWGDQGGKTGFSIGAARKVNALSIVIGPGAGYNLKSNPLPEEDSPSRNSVESKKHSIFQERIRAERESFKAVFDRRRHRIGGLDVEED* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01050 704 MobiDBLite consensus disorder prediction 652 673 - -
Lapu3g01050 704 MobiDBLite consensus disorder prediction 170 184 - -
Lapu3g01050 704 MobiDBLite consensus disorder prediction 27 57 - -
Lapu3g01050 704 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 277 692 IPR026314 GO:0005634
Lapu3g01050 704 MobiDBLite consensus disorder prediction 559 578 - -
Lapu3g01050 704 MobiDBLite consensus disorder prediction 89 190 - -
Lapu3g01050 704 FunFam YLP motif-containing protein 1 isoform X3 330 495 - -
Lapu3g01050 704 MobiDBLite consensus disorder prediction 220 234 - -
Lapu3g01050 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 501 IPR027417 -
Lapu3g01050 704 MobiDBLite consensus disorder prediction 96 112 - -
Lapu3g01050 704 MobiDBLite consensus disorder prediction 62 77 - -
Lapu3g01050 704 MobiDBLite consensus disorder prediction 27 77 - -
Lapu3g01050 704 Gene3D - 330 496 IPR027417 -
Lapu3g01050 704 MobiDBLite consensus disorder prediction 212 234 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01050 K17602 - gmx:100804293 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01050 3 11245511 11255148 Lapu3g01050 3 11245511 11255148 ECH