Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01022 ATGGACTTCAATCTTGCATTAGTTATTGTGATAACCACCATTTGGGGAATTGGTCTTGATGGATGCGACAGCAAGGTTGTGCAGTTCATTTTTGGAGACTCACTCTCGGATGTTGGTAATAACATGCATCTCTCTAGAAGCCTTGCTCAAGCTAGCTTGCCTTGGTATGGTATAGACATGGGAAATGGGTTACCTAACGGAAGGTTCACTAATGGTCGCACAGTCGCTGACATAATAGGTGACCGTACTGGCCTCCCTAGGCCTCCTGCATTCCTGGACCCATCTGTAAGTGAAGATGTTATACTAGAAAATGGTGTGAACTATGCTTCTGGTGGTGGCGGCATCTTGAATGAAACTGGTGCCTATTTTATCCAAAAGTTTTCGCTGGACAAACAAATTGAGCTATTTCAGGGGACACAAGAGTTAATTAGAGGTAAAATTGGAGAAAGGGCCGCTAACAAGTTTTTCAAGGAAGCTCGTTATGTTGTTGCTTTAGGAAGCAATGACTTCATCAACAACTACTTGATGCCAGTTTACAAAGATTCATGGACATACAATGATGAGACCTTCATGGACTACTTAATAGGAACATTGGAAAGACAACTAAAGTTACTTCACAGTTTAGGAGCAAGACAACTGGTGGTTTTTGGGTTGGGTCCAATGGGCTGCATTCCCCTTCAAAGGGTGCTCAGTACAACTGGGAATTGTCGAGAAAAGGCGAACAAGCTGGCTCTTACCTTCAACAAAGCTGTGAGCGAGTTAGTAGATGACTTGGAGAAGCATTTCCCTGATTCAACCTATAGATTTGGAGATGCATATGATGTTGTCTATGATGTGATTAGCAATCCAAATAAGTATGGATTTCAAAACTCAGACTCACCATGTTGTTCCTTTTGGAATATTCGACCCGCCCTTACATGTGTACCTGCTTCAAGTCTGTGCAAAGATAGAAGCAAATATGTGTTTTGGGATGAGTACCACCCCACAGACAGTGCTAATGAGCTTATTGCGACTGAACTTATCAAGAAATTTGGACTTTCAAATTCTGATCAAGGGGGTGCACCTTCACCAGCTCCTGCTGTTGCTCCATCTCCAGAAGACCAATGA 1107 0.4282 MDFNLALVIVITTIWGIGLDGCDSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDRTGLPRPPAFLDPSVSEDVILENGVNYASGGGGILNETGAYFIQKFSLDKQIELFQGTQELIRGKIGERAANKFFKEARYVVALGSNDFINNYLMPVYKDSWTYNDETFMDYLIGTLERQLKLLHSLGARQLVVFGLGPMGCIPLQRVLSTTGNCREKANKLALTFNKAVSELVDDLEKHFPDSTYRFGDAYDVVYDVISNPNKYGFQNSDSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDSANELIATELIKKFGLSNSDQGGAPSPAPAVAPSPEDQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01022 368 Gene3D SGNH hydrolase 27 345 IPR036514 -
Lapu3g01022 368 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Lapu3g01022 368 SUPERFAMILY SGNH hydrolase 156 343 - -
Lapu3g01022 368 MobiDBLite consensus disorder prediction 347 368 - -
Lapu3g01022 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 28 343 - -
Lapu3g01022 368 Pfam GDSL-like Lipase/Acylhydrolase 29 338 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01022 Lapu-Chr3 10949875 10951862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01022 29 337 Acyl Lipid Metabolism Gene Families AT4G10950 32.476 1.56e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01022 - - gmx:100815129 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01022 3 10949875 10951862 Lapu3g01022 3 10949875 10951862 ECH