Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01012 ATGGGTTCTCCCGCTGAAGACCGATCAGAGATAGTGTTCTTCGATGTGGAGACCACCGTTCCCACTCGAACAGGCCAGGGTTTTGCGATTCTTGAATTCGGAGCCATTTTGGTTTGCCCCAAGACGCTCACGGAGCTCCACAACTACTCCACTCTCGTCCGACCCGCCCACCTCTCCGTCATCTCCCCCTTGTCCGAGCGCTGCAATGGCATCACCGCCAACGCCGTTGCCACCGCACCCTCTTTCGCCGACATTGCTCACCTCGTCTACGACCTTCTTCACGGGAGGATTTGGGCGGGTCATAATATCATAAGGTTCGACTGTGTTCGGATTAGAGATGCTTTTGCTGAGATTAATCAGCCGCCACCTGAACCTAAGGGGACCATTGACTCTCTAGTTTTGTTGACTCAAAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGACTTGGACGCCAGACACATAGGAGCTTAGATGATGTTCGGATGAATCTTGAAGTCCTCAAATACTGTGCAACTGTTCTATTCTTGGAGTCAAGTCTCCCGGATATATTCACTGCAAACAGTTGGGTATCACCAAATGCTATAACAAGAAGCCGCAGTAATGGGAAATCCCCATCACAGGGGGGCTTATTAAATATTAATAAGGGTTCTGTGTTATCATCTCCTGCTGTTGAATCCAAAGACAAAAGTCATCCTATAATTTCTTTTTCAGTGAGCAGTCCAAAAGGGGATGCCGTGAATATTGAAGATCCTAATGCAGTTCAATCGGATCCTTTTAACTTGAGTGCTTTGGAGGAAGAAATAAAAAGAGAACCCATTAAGTCAGATGTTTCCGTGGTGGAAAAACCCATGCAAGAGTCACCTGATTTGGCTTCCTCGTCTTCTGTGTTTCAGCCTTGCAGCAGCTCTATTCTTGTTTTAGAACCCAATGGAATATGTGTCCCTTCTATTGATGCATCGCTTGTTCCATCTTTTCATGGCAGTCAAAGGATAGAATTATTGCATGAAGGTTTCCCATTTCAACTTCATTGTACTGATTTGAAAGTGCGGTTTGGAATAAGCACAAAGTTTTTTGATAATGCTGGCCGGCCACGATTGAGTTTTGTGGTTGATCCATCACCAAGTCTATGTAATGTTCTTGATGCATGTGACCACGTTGCTCAGAAGTTGACAGTGGATTCTGGTAGCAGATCTGATTGGAGGCCTGTTGTTATTAGGAAAGAAGGTTTCTTCAACTATCCTACTGTCAGACTGCACATACCTACAGCAGTAGTCGCAGACGTTGCCATTTATGCCACGGAAATATATCAGAAAGAATCGTCTGGAGCAGTGCAAAGACTTCTCTTCAGTAAGTTTGATGCTGCAGAACTTGGTTCCTTGTTTATGCCTGGGACATTTGTTGATGCCTTCTTCTCCTTAGATCCGTATGACTATCAGCAGAATGCAGGGATTAAATTAGTTGCCAAAAAATTGATCATTCATTGCAAATAG 1515 0.4469 MGSPAEDRSEIVFFDVETTVPTRTGQGFAILEFGAILVCPKTLTELHNYSTLVRPAHLSVISPLSERCNGITANAVATAPSFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPNAITRSRSNGKSPSQGGLLNINKGSVLSSPAVESKDKSHPIISFSVSSPKGDAVNIEDPNAVQSDPFNLSALEEEIKREPIKSDVSVVEKPMQESPDLASSSSVFQPCSSSILVLEPNGICVPSIDASLVPSFHGSQRIELLHEGFPFQLHCTDLKVRFGISTKFFDNAGRPRLSFVVDPSPSLCNVLDACDHVAQKLTVDSGSRSDWRPVVIRKEGFFNYPTVRLHIPTAVVADVAIYATEIYQKESSGAVQRLLFSKFDAAELGSLFMPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIHCK* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01012 504 Gene3D - 5 182 IPR036397 GO:0003676
Lapu3g01012 504 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 9 493 - -
Lapu3g01012 504 CDD DEDDh 12 176 - -
Lapu3g01012 504 SUPERFAMILY Ribonuclease H-like 10 180 IPR012337 -
Lapu3g01012 504 SMART exoiiiendus 10 184 IPR013520 -
Lapu3g01012 504 FunFam Exonuclease family protein 4 182 - -
Lapu3g01012 504 Pfam Exonuclease 12 175 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01012 Lapu-Chr3 10850793 10854427 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01012 - - ccaj:109808157 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01012 3 10850793 10854427 Lapu3g01012 3 10850793 10854427 ECH