Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01002 ATGAGTTCTTCTCCGCAACGTTCTCGTGGCGACGGCGAAAAAAGACCCAGGTTTTTCGACTCAAACGCCAAGACCATCTGTTGGTCCAAGGCTGATATTGTCCCCGGTCGTCACCCTGAGAGGTGGCGCAAAGACGCCGCCGGTAACATTGTCTGCAAACGTTTCTACAACTGCATCGGCTGCCTCTGCTACGAGTACGATCACATCATTCCCTTTTCGAAAGGTGGTGAGTCCACAGCAGAAAATTGTCAAATACTTCAATCAAGAGTTAACAGACTCAAATCAGACAAATATAACATTGATTCAGATCAATTGAAAGACTACTCTTGTGAGGTTAATTTTACTGGTATGTCTGCTTCTTTGGGGGTGTTGAGGAATAAGGAGCTTGATATAATTGAGATGGCTGTTTATGGCGATGTGATGCGGCCTGGAAATCAGTGTCGTTGCAGAACTATTGCCGAAAAGCTTGGCAAATTCAAACCAAAAGATGACAAAGATGCTTGTAAGTTGCCACAGGGATGA 522 0.4502 MSSSPQRSRGDGEKRPRFFDSNAKTICWSKADIVPGRHPERWRKDAAGNIVCKRFYNCIGCLCYEYDHIIPFSKGGESTAENCQILQSRVNRLKSDKYNIDSDQLKDYSCEVNFTGMSASLGVLRNKELDIIEMAVYGDVMRPGNQCRCRTIAEKLGKFKPKDDKDACKLPQG* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01002 173 CDD HNHc 53 95 IPR003615 -
Lapu3g01002 173 PANTHER HNH ENDONUCLEASE 7 151 - -
Lapu3g01002 173 Pfam HNH endonuclease 65 96 IPR002711 GO:0003676|GO:0004519|GO:0008270
Lapu3g01002 173 Gene3D - 33 113 - -
Lapu3g01002 173 SMART HNH_5 46 92 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01002 Lapu-Chr3 10751499 10755775 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01002 - - gmx:100527904 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01002 3 10751499 10755775 Lapu3g01002 3 10751499 10755775 ECH