Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00996 ATGGAGTACTCTAATGGGTTCCCTAGAAAAAGAGATGTTTCTCTTCAGGAACTTAGCAGTAGGCTTGCTGAGTTTGCTGAAGTAAGAGGATGGGATCAATATCACAGTCCCAGAAACCTTCTTTTAGCTCTTGTTGGAGAGGTGGGAGAGCTATCTGAGATATTCCAGTGGAAAGGAGAGGTTGCTAAGGGATTACCCAATTGGAGTAGTGATGATAAGGAGCACTTAGAAGAGGAACTTTCAGATGTTTTGCTTTATCTAGTGCGTCTTGCAGATGTTTGTGGGCTAGATCTGGGACAGGCAGCTCTGACCAAAATAGTGAAGAATGCTCAGAAATACCCAGTTACAAGCACTGATCATACAACCACTTCCTCTCGCAACTAG 384 0.4375 MEYSNGFPRKRDVSLQELSSRLAEFAEVRGWDQYHSPRNLLLALVGEVGELSEIFQWKGEVAKGLPNWSSDDKEHLEEELSDVLLYLVRLADVCGLDLGQAALTKIVKNAQKYPVTSTDHTTTSSRN* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00996 127 CDD NTP-PPase_RS21-C6_like 21 109 IPR025984 GO:0009143|GO:0047429
Lapu3g00996 127 Gene3D - 8 119 - -
Lapu3g00996 127 Pfam MazG-like family 47 121 IPR025984 GO:0009143|GO:0047429
Lapu3g00996 127 PIRSF UCP029826_pph 6 127 IPR025984 GO:0009143|GO:0047429
Lapu3g00996 127 SUPERFAMILY all-alpha NTP pyrophosphatases 13 117 - -
Lapu3g00996 127 PANTHER - 9 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00996 Lapu-Chr3 10697577 10698322 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00996 K16904 - gmx:100500294 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00996 3 10697577 10698322 Lapu3g00996 3 10697577 10698322 ECH