Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00982 ATGGATGATGATGGAGATTTTGAGTTGTTCTTTTACAGTTGGAATGCAAAGAATCCTACTGATCGGCTTTTCATTATATCTTGTTTTGTTGCTGCTCTTGTTGGAATATTGACCATAGCCTACACGGCCTTTCAATGGAGGAGAAACATCAATCTAAGTTGGATGAAAGCCATAGCTAGATCTAAGAAAAACCCAAAGGCGAGGCACAAAATTCCTGTGGCCCCTCATACGTGGGAGTTAGAATCCGTGTCTCGTGCAAAAAATTTAAACTGCTGTGTATGTTTTAAGTCCATGTCACCCTCTCAAACTCTTGGGCCTATTGTAGCTTCTGAAGGTTTCATCCATCGTTGCTGTATTTGTGGTGCTGTGGCTCATCTAAGCTGTTCCTCTAGTGCCCACAAGGACTGCAAGTGTGTTTCAATGATTGGATATGAGCATGTCACGCACCAATGGGCTGTTCGTTGGACAGATGTAGCTGACCAACCTGACGAAACTGCTCTCTGTAGTTACTGTGAAGAGCCATGTGGTGGGACGTTCCTCAGTGGTTCCCCTATATGGTCTTGCTTGTGGTGCCAACGTTTAGTACATGTTGATTGTCATAGTACAATGTCTAATGAAACGGGTGATATTTGTGATCTGGGCCAATTTAGAAGATTGATACTATCACCACTGTATGTGAAGGAATTAAACTGGAACATGCCAGGTGGATTTTTGAGCTCAATTACTCATGGGGCAAATGAGATAGCATCTTCTGTCCGGGCAAGTATTAGGAACCAGAGCAAAAAGTACAAACATGAAAATGAACCATCAGCCGAATCAGTGAATAGTGAGAACGTTGGTGAAATGTCCACAGAAAGTACAGCTAATTCTCATCAAATACAGAATGGTCATCATGAAGTGGATGAAAAAAGTAGCTCAAATAAGGAGGTTCGACATCAAGATAGTGAAGTAGATAATAAGGTGGATAGAAAACCCAATCTTGGACGCAGTTCATCAATCAATCAGAGGGATGAATCCCACACATTAGGAGTGAAGCAGAAATATGATTTGGTTGATTTGCCTCCAGATGCAAGACCATTGTTAGTTTTTATAAACAAGAAGAGTGGAGCCCAGCGAGGAGACTCACTCAGGACACGTCTGAATATTCTTTTAAATCCTGTTCAGGTGTTTGAATTGAGCTCAACACAGGGGCCAGAAATGGGACTCTATTTGTTTAGAAAGGTCTCTCACTTCAGAGTTCTTGTATGTGGGGGAGATGGTACTGTTGGTTGGGTTCTGAATGCAATAGACAAGCAAAATTTTGTTTCCCCTCCCCCGGTTGCCATTCTACCTGCTGGTACAGGAAATGATCTTGCTAGAGTTCTGTCCTGGGGAGGTGGCATGGGTCCAGTGGAGAGGCAAGGAGGCCTTAGTACATTTTTGCATCAAATAGAACTTGCTGCTGTTACTATTCTTGACAGGTGGAAGGTCACAATTAGTAATCCACAAGGAAAACAACAGCTGCAGCCCACAAAGTTTATGAACAATTATCTTGGAATTGGTTGTGATGCAAAGGTTGCTTTGGACATTCATAATCTGCGTGAAGAGAATCCAGATAAGTTTTATAACCAGTTTATGAATAAAGTTCTATATGCAAGAGAGGGCGCAAAAAGCATTATGGATAGGACATTTGCGGATTTACCTTGGCAGATTCGCGTTGAGGTGGATGGAGTTGAAATTGAGGTCCCTGAGGATGCAGAAGGCGTGCTTGTTGCAAATATTGGGAGTTACATGGGAGGTGTAGATTTGTGGCAAAATGAGGATGACAATTATGATAATTTTGATCAACAATCCATGCATGATAAGGTGCTTGAAGTTGTAAGCATATCGGGAACATGGCACCTGGGAAAGCTTCAGGTAGGGCTTTCTCGAGCTCGAAGACTTGCACAAGGACAGTCAATTAAGATACAATTGTTTGCCATGTTTCCTGTTCAAATTGATGGAGAGCCATGGTTTCAGCAACCCTGCACAATTTCCATAAGCCATCATGGCCAGGCTTTCATGTTGAAGAGGGTGGCTGAGGAACCTCTTGGTCCTGCATCTGCAATAATTGCTGAAGTACTAGAGAATGCTGAAACGCATAATGTAATTAATGCTTCACAAAAGAGAGCTCTTCTTCATGAAATGGCATTGAGGATGTCCTAG 2184 0.4245 MDDDGDFELFFYSWNAKNPTDRLFIISCFVAALVGILTIAYTAFQWRRNINLSWMKAIARSKKNPKARHKIPVAPHTWELESVSRAKNLNCCVCFKSMSPSQTLGPIVASEGFIHRCCICGAVAHLSCSSSAHKDCKCVSMIGYEHVTHQWAVRWTDVADQPDETALCSYCEEPCGGTFLSGSPIWSCLWCQRLVHVDCHSTMSNETGDICDLGQFRRLILSPLYVKELNWNMPGGFLSSITHGANEIASSVRASIRNQSKKYKHENEPSAESVNSENVGEMSTESTANSHQIQNGHHEVDEKSSSNKEVRHQDSEVDNKVDRKPNLGRSSSINQRDESHTLGVKQKYDLVDLPPDARPLLVFINKKSGAQRGDSLRTRLNILLNPVQVFELSSTQGPEMGLYLFRKVSHFRVLVCGGDGTVGWVLNAIDKQNFVSPPPVAILPAGTGNDLARVLSWGGGMGPVERQGGLSTFLHQIELAAVTILDRWKVTISNPQGKQQLQPTKFMNNYLGIGCDAKVALDIHNLREENPDKFYNQFMNKVLYAREGAKSIMDRTFADLPWQIRVEVDGVEIEVPEDAEGVLVANIGSYMGGVDLWQNEDDNYDNFDQQSMHDKVLEVVSISGTWHLGKLQVGLSRARRLAQGQSIKIQLFAMFPVQIDGEPWFQQPCTISISHHGQAFMLKRVAEEPLGPASAIIAEVLENAETHNVINASQKRALLHEMALRMS* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00982 727 Coils Coil 723 727 - -
Lapu3g00982 727 SMART dagk_c4a_7 359 488 IPR001206 GO:0016301
Lapu3g00982 727 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 355 494 IPR001206 GO:0016301
Lapu3g00982 727 Gene3D - 356 468 IPR017438 -
Lapu3g00982 727 CDD C1 76 136 - -
Lapu3g00982 727 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 148 211 IPR002219 -
Lapu3g00982 727 FunFam Diacylglycerol kinase 355 479 - -
Lapu3g00982 727 CDD C1_DGK_rpt2 149 214 - -
Lapu3g00982 727 SMART c1_12 76 136 IPR002219 -
Lapu3g00982 727 SMART c1_12 149 211 IPR002219 -
Lapu3g00982 727 FunFam Diacylglycerol kinase 504 673 - -
Lapu3g00982 727 MobiDBLite consensus disorder prediction 295 325 - -
Lapu3g00982 727 FunFam Diacylglycerol kinase 147 207 - -
Lapu3g00982 727 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 358 681 IPR016064 -
Lapu3g00982 727 Pfam Phorbol esters/diacylglycerol binding domain (C1 domain) 149 209 IPR002219 -
Lapu3g00982 727 Gene3D - 147 207 - -
Lapu3g00982 727 MobiDBLite consensus disorder prediction 259 341 - -
Lapu3g00982 727 SMART dagk_c4b_2 506 663 IPR000756 GO:0004143|GO:0007205
Lapu3g00982 727 Gene3D - 504 673 - -
Lapu3g00982 727 Pfam Diacylglycerol kinase catalytic domain 359 459 IPR001206 GO:0016301
Lapu3g00982 727 PANTHER DIACYLGLYCEROL KINASE 30 684 IPR037607 GO:0004143|GO:0007165
Lapu3g00982 727 Pfam Diacylglycerol kinase accessory domain 507 663 IPR000756 GO:0004143|GO:0007205
Lapu3g00982 727 MobiDBLite consensus disorder prediction 272 294 - -
Lapu3g00982 727 SUPERFAMILY Cysteine-rich domain 138 206 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00982 Lapu-Chr3 10594795 10607113 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00982 1 727 Acyl Lipid Metabolism Gene Families AT5G07920 74.625 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00982 K00901 - gmx:100794891 1413.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00982 3 10594795 10607113 Lapu3g00982 3 10594795 10607113 ECH