Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00976 ATGCCTGCTCTAGCCCTTGCACTGCTTCTTTTGGCTCTCACTGGCACTTCAAGTGCAACTTGGTGCGTTTGCAAGGATGGAGGCGACGCGATCCTGCAGAAAACATTGGACTATGCTTGTGGAGCTGGTGCTGACTGTAACCCTCTCCATCAAAACGGGCCTTGTTTCCAGCCCAACACCGTCAGGGCCCACTGCAACTACGCCGTGAATAGCTACTTCCAAAAGAAGGGTCAAGCTCAAGGGTCCTGTGAGTTTGCAGGAACCGCCACTGTTACTGCATCTGACCCCAGCACTGGCGGTTGTGTCTACCCTTCAAGTGTTAGTGCTGCAGGCACTGGTACAACTCCTGTCACAACTACACCAACCATGGGCACCACTCCTACCACTGGAACCCCATCGACTGGTACCGGTACCGGAACCGGTACCGGAACCGGCACCGGCACCGGCACCGGCACTGGTACTACTCCATACAGCACAACACCTGGAGTATTAGGAGGCATTGGCAGTGGCATGGGACCTTCAGGATCTGGCATGAATGATGACAGTCATGGTGGCCTTAGACTAGTGCACTCTAGTTTCTTCTTAGTCACTCTCTTCTCTTCCTCCTTCATGATCTTCTGGTGGGGTTGA 630 0.5397 MPALALALLLLALTGTSSATWCVCKDGGDAILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQKKGQAQGSCEFAGTATVTASDPSTGGCVYPSSVSAAGTGTTPVTTTPTMGTTPTTGTPSTGTGTGTGTGTGTGTGTGTGTTPYSTTPGVLGGIGSGMGPSGSGMNDDSHGGLRLVHSSFFLVTLFSSSFMIFWWG* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00976 209 MobiDBLite consensus disorder prediction 111 159 - -
Lapu3g00976 209 SMART X8_cls 20 103 IPR012946 -
Lapu3g00976 209 Gene3D - 15 110 - -
Lapu3g00976 209 PANTHER BETA-1,3 GLUCANASE 7 123 IPR044788 -
Lapu3g00976 209 FunFam Glucan endo-1,3-beta-glucosidase 4 15 107 - -
Lapu3g00976 209 Pfam X8 domain 20 90 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00976 Lapu-Chr3 10540309 10544469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00976 20 105 Glycoside Hydrolase AT2G05790 50.000 3.99e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00976 - - gmx:100500078 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00976 3 10540309 10544469 Lapu3g00976 3 10540309 10544469 ECH