Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00958 TCCAAAATGCAGAGTTTAGTTCGCAAACTGGTGGAACACCGCCCCCATTCTCATGTCACCTCTCAGCGTATCTTCCATACTTTCTCCTCTGTTCTAAAACCTTCACAACCCCAACTGCATCATCGCAACCACATTCCTTCTTTCTTCCTCACTCACCCACCTCATCACTTTCACTCATGCCGCTACTTTTCCACCAAATTTTGCGCATTTCTCTCTCGACCTACGATCTCGCGCCGCTTCGCCTTCAACTCTCTCCTCGGAGTCCGTACCAGAAGCGTCCCACTAGATCACAGGCCAATCCTTCATTCTTTTCGTCGACACAACTTCAATTTCAACAACAATAATGAATTCTCCAGGCGTTCCTGGCGATCATGGCTCCGTGGGCTAACATCTAATGACGCGGTTTTGGGCTTGATTATAGCAAATGTTGCTATTTTTTTATTGTGGAGGATAGAAGATGAAAAGTTTATGATAAAAAACTTTGCCATCTCTTTGGACAATTTTAAGAGTGGACGTTTGCACACTTTGATTACCAACGCATTCAGTCACGTTGATACCTGGCATATAGTTTCCAATATGATGGCACTCTACTTCTTTGGAATGAATGTTGGAAGAAATTTTGGACCTGAATTTCTGCTGAAGCTGTATCTTGCAGGGGCAGTTGGTGGCTCTATTTTTTACTTAATGCATCAGGCCTATAAAGCGCAAACATCAAAGGAATGGAGAGCTATGATTGTGTCAAAGGAATTAGCATTGGGGGCAAGTGGAGCTGTGAATGCTGTTATGCTACTCGACATATTTCTCTTTCCAAAAGCAACCATTTACCTTGACTTTTTTATACCAGTTCCTGCTCTCATGCTGGGTATCTTTTTTATTGGGAAAGATATGCTCGGGATACTAAAGGGAGACAGTCAAATAGCAGGATCTGCACATTTGGGGGGTGCTGTTGTTGCAGCCATAGCTTGGGCAGGTGTTCGGAAAGGAAGATTCTAA 993 0.4361 SKMQSLVRKLVEHRPHSHVTSQRIFHTFSSVLKPSQPQLHHRNHIPSFFLTHPPHHFHSCRYFSTKFCAFLSRPTISRRFAFNSLLGVRTRSVPLDHRPILHSFRRHNFNFNNNNEFSRRSWRSWLRGLTSNDAVLGLIIANVAIFLLWRIEDEKFMIKNFAISLDNFKSGRLHTLITNAFSHVDTWHIVSNMMALYFFGMNVGRNFGPEFLLKLYLAGAVGGSIFYLMHQAYKAQTSKEWRAMIVSKELALGASGAVNAVMLLDIFLFPKATIYLDFFIPVPALMLGIFFIGKDMLGILKGDSQIAGSAHLGGAVVAAIAWAGVRKGRF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00958 330 Pfam Rhomboid family 169 324 IPR022764 GO:0004252|GO:0016020
Lapu3g00958 330 FunFam RHOMBOID-like protein 12, mitochondrial 128 329 - -
Lapu3g00958 330 SUPERFAMILY Rhomboid-like 135 327 IPR035952 -
Lapu3g00958 330 Gene3D - 132 323 IPR035952 -
Lapu3g00958 330 PANTHER RHOMBOID PROTEASE 25 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00958 - - vra:106767388 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00958 3 10369247 10381666 Lapu3g00958 3 10369247 10381666 ECH