Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00949 ATGGGTTGGGCCATAGCTCTACACGGCGGCGCCGGTGACATCCCCCTTTCACTGCCACCGGAGCGCCGCCAGCCGCGAGAGGAAGCACTCCGCCACTGCCTTCAAATCGGCGTCGAAACTCTCAAAGCCAAACTGCCTCCCCTCGACGTGGTTGAGCGCGTCGTTCGGGAGCTGGAGAACATTCCGCAGTTCAACGCGGGGAAGGGATCTGTGCTCACTTCCAAAGGCACCGTCGAAATGGAAGCTTCCATCATGGACGGCGTCACTATGAATTGCGGAGCCGTTTCCGGCCTCACTACGGTCGTCAACGCCATCTCTCTCGCTCGATTGGTCATGGAGAAGACGCCTCACATTTATCTCGCTTTCGATGGAGCAGAGGAATTTGCAAGACAACAAATCCTTCCTCTTCAGGGCGTTGAGACTGTCGATTCAAGCCATTTTGTTACTGCAGAAAACATTGAAAGGCTAAAGCAGGCAAAAGAAGCCAATAGGGTCCAGATTGACTATACCCAACCTATCCAAAACGATACTAAGAAAGAAACAGCAATTGCTAATGGTGATAGTCAAATCGGAACTGTTGGGTGTGTGGCTGTTGATGGTAATGGAAATTTAGCTTCTGCAACATCTACTGGTGGGTTAGTGAACAAAATGGCTGGCCGAATTGGTGACACACCGGTCATAGGCGCCGGCACCTATGCTGATGCACGTTGTGCAGTTTCAGCCACAGGCAAAGGTGAAGCAATAGTACGTGGGACTGTGGCAAGAGATGTCGCTGCTCTGATGGAGTTTAAGGGTCTTTCCCTCGAGGAATCTGCGACTTGTGTTGTGCATGAGCGTACGCCAAAAGGCACAGTAGGTTTGGTTGCTGTGTCTGCCAAAGGAGAAGTTGCAATGCCTTTTAATACAACAGGCATGTTCAGAGCGTGTGCTACTGAAGATGGGTATTCTGAGATTGCAATTTGGCCTGCTGCCAAAATTGAGTGA 984 0.5112 MGWAIALHGGAGDIPLSLPPERRQPREEALRHCLQIGVETLKAKLPPLDVVERVVRELENIPQFNAGKGSVLTSKGTVEMEASIMDGVTMNCGAVSGLTTVVNAISLARLVMEKTPHIYLAFDGAEEFARQQILPLQGVETVDSSHFVTAENIERLKQAKEANRVQIDYTQPIQNDTKKETAIANGDSQIGTVGCVAVDGNGNLASATSTGGLVNKMAGRIGDTPVIGAGTYADARCAVSATGKGEAIVRGTVARDVAALMEFKGLSLEESATCVVHERTPKGTVGLVAVSAKGEVAMPFNTTGMFRACATEDGYSEIAIWPAAKIE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00949 327 Gene3D (Glycosyl)asparaginase 192 324 - -
Lapu3g00949 327 PANTHER L-ASPARAGINASE 3 308 IPR000246 GO:0016787
Lapu3g00949 327 FunFam Isoaspartyl peptidase/L-asparaginase 192 323 - -
Lapu3g00949 327 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 321 IPR029055 -
Lapu3g00949 327 CDD Asparaginase_2 4 314 - -
Lapu3g00949 327 Pfam Asparaginase 3 321 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00949 Lapu-Chr3 10249862 10251751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00949 5 299 Miscellaneous Gene Families AT4G00590 26.300 4.97e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00949 K13051 - gmx:100799400 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00949 3 10249862 10251751 Lapu3g00949 3 10249862 10251751 ECH