Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00934 ATGTTCCGCATAAGCAACACCGTTGTCGGCGCGCTCAACATCCTCACCCTGCTCCTGGGCGTGGCCGCCGTGGCCTCCTCCGCCTACATCCACATCCGCGGCGGCTCAGACTGCCAGAAGGTCCTGCAGGTGCCGCTGCTCGTTGGCGGCGTTTTCGTGGTGCTGGTCTCCGCCTTGGGAATCGTGGGGTCGCTGTGCCGCGTCAACGTGGCGCTCTACGCCTACCTCTTCGTCACGTTCGCACTCATCGTGGGCCTCACCTTCTTCACTGTCTTTACGCTATTCGTGACAAACAGGAAGGTGGGGCAGCAGGTTTCCGGCAAGGGCTACGGCGAGTATAGGGTGGCCGATTTCTCGCACTGGCTGCAACGCTACGTCGTCAACAACAAGAACTGGGACGAGGTGAAGAGTTGCTTGATGGACGCGCACGTGTGCCAGAACCTCGCCCTCCACGGTGGCCGCAACAACGACTCCCTCATTTTCAAACACCTATCTACCACGCAGTCTGGTTGTTGTAAACCACCAGTGTATTGTGGGTTCATAATGAAGAATGGTACGTTCTGGGAAGTGCCAAAGAAGGGTCCAGCAGTGAATAGTTCTGACTGCAACACTTGGAACAATAGGGAAGACAAACTGTGCTACGATTGCAGTTCATGCAAAGGAGGTGTTTTGGCTAACATAAGGAACCAATGGAGACGTCTTACTGTATTCAATGCATGCGTGCTTGTGCTCGTCACTGCCATATATTCCTTGGGATGCTACGCCATCAAGAACAACAGATCCGATTCACGCTGCAACCACCTCAAAACACCATGCCCTTGA 822 0.5474 MFRISNTVVGALNILTLLLGVAAVASSAYIHIRGGSDCQKVLQVPLLVGGVFVVLVSALGIVGSLCRVNVALYAYLFVTFALIVGLTFFTVFTLFVTNRKVGQQVSGKGYGEYRVADFSHWLQRYVVNNKNWDEVKSCLMDAHVCQNLALHGGRNNDSLIFKHLSTTQSGCCKPPVYCGFIMKNGTFWEVPKKGPAVNSSDCNTWNNREDKLCYDCSSCKGGVLANIRNQWRRLTVFNACVLVLVTAIYSLGCYAIKNNRSDSRCNHLKTPCP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00934 273 PANTHER TETRASPANIN-8-RELATED 3 262 IPR044991 GO:0009734|GO:0016020
Lapu3g00934 273 Pfam Tetraspanin family 6 250 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00934 Lapu-Chr3 10055847 10057593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00934 1 268 Miscellaneous Gene Families AT1G18520 44.526 4.60e-82 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00934 - - gmx:100815322 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00934 3 10055847 10057593 Lapu3g00934 3 10055847 10057593 ECH