Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00928 ATGGAGTCTGACGAAGACGATTTTGTTTTCTATGGAACGCCGATAGAGCGTGAGGACGATTTAATCAGCCGCAAGAAGAAGGCCATTGCCGAGTCCTCCGGTCAACTCCGAACCCTCCCCGCTTGGAAGCAAGAGGTTAGAGACGAGGAAGGGCGGAGAAGATTCCATGGAGCATTTACAGGAGGCTATTCCGCTGGTTACTATAATACAGTGGGCTCAAAGGAAGGGTGGGCACCCCAGTCATTTAAATCATCCAGGAAGAACAGAGCTGAATTCAAAGAGCAGAATATACTGAATTTTCTAGATGAAGACGAGAAATCTGAATTGGAAGGTCGTTTTTTGGGGACTACTTCACAGTTTGATACATTTGGTTTCACTGCTGCTGAAATTGCTCGTAAACAAGCTGAGAAGGAACAGAAACAGAGGCCATCCATAATACCTGGACCTGCTCCTGATGAAATAGTTGTTCCGGCCACTGAGTCTGTTGGGGTAAAACTGCTCTTAAAGATGGGGTGGAGTCGTGGCCGCACGATCAAGGATTCACATTCTGATGCACTCTATGATGCCAGAAGACAGGCACGCAGAGCTTTCTTAGCATTTTCTTCTGATGATCCAAAAGTGAAAGTATCAGAGTCCGAGTCTGTCAAGGGTGATATTAAAAATTTTCCCGAGGAGCCTGTGAATGACGAAGTTCAGTTTTCTAAGAGCACACCGGTTTATGTACTAAACCCAAAGCAAGACCAGCATGGATTAGGTTTTGATCCTTACAAGCATGCTCCGGAGTTTAGAGAGAAAAAAAGATCACGCTTAGCCAACAAGGGGGGACTTGGGTTCTCTAGAGATAGTCTTTTTGGTTTGAAGTCAGGAAAGGCTGCCCCTGGTTTTGGCATTGGAGCTCTGGAGGAGCTTGATGCTGAGGATGAGGATGTCTATGCCAGTGGTTACGAATTTGAAGATGCTTATGTTCAAGAAGTAGAAGAACCTTCAACATTGAGATTAGAAAACCCGACAAAGAAAGAGCCGAAGGACCAGGGTGATCTGCCTGGTTTCAGAGTTGCATCCAATTCTGACTATAAAATGGAAAGATTTGAGGCTCCTCTGATTCCTAAGGATTTTGTGCCCCACCACAAATTTTCTGGACCACTTGACGTTAACCGCAAGAGCTATGAAGTTACTCCACCGGACACTCCTCCTCCAGAGGATGGCAATTTAAAATTATTAATTGAAGGGGTTGCTAATCTGGTTGCTAAGTGTGGTAAATTATATGAGGATTTATCTAGAGAAAAGAATCAATCAAATCCATTGTTTAGTTTTCTTTCTGGAGGAACTGGCCATGAATATTATGCTAGGAAATTGTGGGAGGCACAGCAGAAACACAATGATCAGACTAGTCAGCAGTTGGATGGAAAATTGACTCCCAGTGTGAAGAGGCTAACAGCTGAGAGCCGAGGCCAGATCTTAGGGGAAAAACCTCTAGAAAAAAGCTCCCAAGATCCATCCTCATTTGTTCCTTCTACAGATATTCAACTCCAATTTAATCTTGCTGATACATTTACCAACTCTGCGTCAGTTAGTGAGTTAATGAATGTAGAAAAGCCTTTCAAAGATGATCCAGAAAAGCAAGAAAGATTTGAGCAGTTCCTTAAGGAGAAATATAAAGGGGGACTGCGCTCTGCAAGTTCTAGTTTAGCTAGTGATATGTCAGAGGCTGCTCGTGCTCAAGAAAGAATAAGTTTTGAGGCAGCAGCTGAGGCCATAGAAAAGGGTCGACAGGGCAGGGGAAGCAAGCCTTTAACTCCATCTGCCATGGATTTCATCCCAGGTGGTGTTATGCAGTTTACTTCTAGTGAAGTAGAGCGAAAAAAAGACCTTCAAGCTGAAGATATTTTGAGGAAGAAAATGTACCCTAAGAGGGAAGAGTTTCAATGGCGCCCTTCACCCCTTCTGTGCAAACGCTTTGATCTTATTGATCCTTATATGGGGAAGCCACCACCTGCTCCACGAATTAGGAGTAAAATAGATTCGTTGATTTTTACATCAGATTCAGTCAAAGGTATTAAACTGGACGACCCTGTTAGTTCAAAGAAAGAAATCCCACCTTTGCAACAATCTACTAATGAAGACATAACCAAAAGTATTACTGAAAATGAAACTGAAGGGGACGTGGAAGTCAAAAATATTGAAAGGCCAGTTGATCTATACAAGGCTATTTTCTCCGATGATTCAGATGACGAAGGAGGAGATTCTGGTATTGGGAGAGTGGATAATCAAGAAAAGAAAGCTGAAGTAGCTAATACAGCATTGAGCCGATTGATTGCTGGTGATTTTCTGGAATCATTGGGCAAGGAACTAGGAATTGAGGTTCCTCCTGATATGCCTTACCCCACACAGAAGTCCAAGAACATTGCACCGCAGAAAGAACTTGTTAATGAAGATACAAGAACTGACATCCTCGACAGTCAAAATAATGACGAAATGTCCTTAAATCATGATTTGCCATATGATAAGCATATTTCTCATGAGGGTGATCTATTAAAAGGTGACACTATTCATGGAAATAAGCGTGAGAGCAGTAATGTGAAAATCAAGGGAACCAGTACCATGAACTATAAACCTGACAAGTCTGATGGGGAGAATATTAAAGATGTCAGGAAAATAAAATCGCCTCTAGTCCGCAGCCAAGACTATAGCAGCAGTTCAGAAGAAGAGAAAAGCAGAAAGCGATCTAGTAGGGAAAAATACGATGAACACAGGAAACTTAAAACCCCTGTAACACACCGCCGAGATTATAATAGCAGTTCCTCATTAGAAGAGGAAAAGAGCAGAAAACGTTCTAGACATCATCGACATAAGAGGCGTGATGCAGGAAGTGATTCATCCAGTGATGATGAAAGAAGAGACAGACACAGTTCAAGGTCAAAAGGGACAAGGAAAAGTTCTTCCCGAGAAAAAAGCAGAAGTGAAAGACACTCAAAACATCACAAACACAGAAAGCACAATAGACCCTCTCGTTATCGTAATGAGAAGGACAATTCACATTCCAGAAATGAGAAAAAGCGGAGGGAATGA 3069 0.4249 MESDEDDFVFYGTPIEREDDLISRKKKAIAESSGQLRTLPAWKQEVRDEEGRRRFHGAFTGGYSAGYYNTVGSKEGWAPQSFKSSRKNRAEFKEQNILNFLDEDEKSELEGRFLGTTSQFDTFGFTAAEIARKQAEKEQKQRPSIIPGPAPDEIVVPATESVGVKLLLKMGWSRGRTIKDSHSDALYDARRQARRAFLAFSSDDPKVKVSESESVKGDIKNFPEEPVNDEVQFSKSTPVYVLNPKQDQHGLGFDPYKHAPEFREKKRSRLANKGGLGFSRDSLFGLKSGKAAPGFGIGALEELDAEDEDVYASGYEFEDAYVQEVEEPSTLRLENPTKKEPKDQGDLPGFRVASNSDYKMERFEAPLIPKDFVPHHKFSGPLDVNRKSYEVTPPDTPPPEDGNLKLLIEGVANLVAKCGKLYEDLSREKNQSNPLFSFLSGGTGHEYYARKLWEAQQKHNDQTSQQLDGKLTPSVKRLTAESRGQILGEKPLEKSSQDPSSFVPSTDIQLQFNLADTFTNSASVSELMNVEKPFKDDPEKQERFEQFLKEKYKGGLRSASSSLASDMSEAARAQERISFEAAAEAIEKGRQGRGSKPLTPSAMDFIPGGVMQFTSSEVERKKDLQAEDILRKKMYPKREEFQWRPSPLLCKRFDLIDPYMGKPPPAPRIRSKIDSLIFTSDSVKGIKLDDPVSSKKEIPPLQQSTNEDITKSITENETEGDVEVKNIERPVDLYKAIFSDDSDDEGGDSGIGRVDNQEKKAEVANTALSRLIAGDFLESLGKELGIEVPPDMPYPTQKSKNIAPQKELVNEDTRTDILDSQNNDEMSLNHDLPYDKHISHEGDLLKGDTIHGNKRESSNVKIKGTSTMNYKPDKSDGENIKDVRKIKSPLVRSQDYSSSSEEEKSRKRSSREKYDEHRKLKTPVTHRRDYNSSSSLEEEKSRKRSRHHRHKRRDAGSDSSSDDERRDRHSSRSKGTRKSSSREKSRSERHSKHHKHRKHNRPSRYRNEKDNSHSRNEKKRRE* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00928 1022 Pfam Surp module 407 454 IPR000061 GO:0003723|GO:0006396
Lapu3g00928 1022 Pfam Protein of unknown function (DUF1604) 39 119 IPR011666 GO:0006397
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 897 942 - -
Lapu3g00928 1022 SMART surpneu2 405 457 IPR000061 GO:0003723|GO:0006396
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 805 819 - -
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 788 1022 - -
Lapu3g00928 1022 Gene3D Surp module 380 462 IPR035967 GO:0003723|GO:0006396
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 1004 1022 - -
Lapu3g00928 1022 FunFam G patch domain-containing protein TGH 371 461 - -
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 738 759 - -
Lapu3g00928 1022 SUPERFAMILY Surp module (SWAP domain) 385 457 IPR035967 GO:0003723|GO:0006396
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 954 986 - -
Lapu3g00928 1022 ProSiteProfiles SURP motif repeat profile. 407 451 IPR000061 GO:0003723|GO:0006396
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 331 346 - -
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 874 889 - -
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 326 350 - -
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 859 873 - -
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 829 858 - -
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 987 1003 - -
Lapu3g00928 1022 MobiDBLite consensus disorder prediction 483 503 - -
Lapu3g00928 1022 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 1020 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00928 K13123 - gmx:100796934 1547.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00928 3 9990529 10001636 Lapu3g00928 3 9990529 10001636 ECH