Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00921 ATGGTGCAAGATTCTGAAAAGAGATTCCATTCCATCATGGACAAGCTCTTCCATTCTCCCAAACCCCCTTCTTCCTCCAGTTCATCTGGAGTGCAGTTATCAGGGAGTAAGAAACGTCCTTACCAGTCCGGGGTGATGGAGTTGAATCGGAGAGGGGATGTTGCTGAGGGACAGCAGTCCTCCTCGGCGGCGACCACGGTACTGCAGGGACCTCTCTGCCGACCGTGGGATCGTGGTGACTTTATGAGGAGATTGGCTACATTCAAATCTATGTCATGGTTCGCTAAACCAAAGGTAGTGAGTGCAGTAAATTGTGCTAGTAGAGGTTGGATCAATGTGGATATTGACACCATAGCCTGTGAATCATGTGGAGCACGTCTTCTTTTCTCCACACCAGCATCTTGGAATCAGCAACAGGTGGAGAAGGCAGCATTAGTATTTAGCTTAAAGTTGGATAATGGACATAAATTACTTTGCCCATGGATTGATAATGCCTGCAATGAAACACTGGCACGATTTCCTCCTACAACTCCTGAGATATTAGTTGAAAATTTCAGACAACAGTGTTTTGCACTCTTGCAACTATCAGCTCTTCCACGAATTTCATCTTCAGCTGTGGCCTACATCCAAAGCCAAAGCCCACTTATGGAAGACTTTCTCGGACAATCTTTGATGCTGGAGTATGGAAATGGATCTACTCAAAATTCTAGGATTGAGGATGTTAGTAATCAGGAGGAACTGAAATTGTATTATCAGGCTCAAAAGCTTATCAGTTTATGCGGTTGGAAACTTCGTCCTCTACCTTATGTAGTTGATTGTAAGGATATGTCAGATCAGTCTCTTAAAAATGCAACTACTCTTGCAATTCATTCTGCTGGCACTGATGAAAATAAATTAGATGAAAACTCCATGGATTTTATTGGGGAACAAGTGGATCCCAATTCTGCAGTATTAGATTGCACCCTATGTGGGGCCACAATTGGATTGTGGGCATTCTGTACAGTTCCTCGGCCAGTGGAATCATTCAGATTAGTGGGATATGCTGAAGTGAATGGTGAAAATGCTTTTGTGGCCCACAACTTATTGAATAAAGATGATCTTGAAAATAGGCAGGCTGCCAGGCCTGATGTTGCAAATTCATCAAAGGATACTTCTTCAAGTCTAAATATGACAATTGCAGGGGGTCCTCCCCCAACGAAGCAAAACTTTAAAGCAATAATATCTCTGCCTGTTATTGGTCAGAATTTAAGGGCTCGTCTTTCGTATGATTCTAATTTTAGGGATCATGCTTTTGTTAACAAAGGCGGTAGTGAATCAAATTTACAGGAGATAACTGACAATGTCATTGATGCTTCTATTGGACAACTTGTTCCCGTGTCATCTGAAACCAGGGAGATAGGGGATTATGAAACTGGTTCTCAAGCAAGGATCAGTGATTCAGATGTTATCATAAGCACCCATCATGCAGGACAATCATTTGCTCTTAAAGATAAAATGCCTACACACACAGATGCTGATAAATTGAATACTTCAGCTGCCGGATATCATAGTTCTCAGAAAGACTCTACAGAAGGGGAAGCAGTGTCTGTTTTGCATAAGACATCGGATGGCAAAGTTGGTAGTGACAGAGAAGAGATTCCTATTAATAGTGAAGATTTACATTCTAGTTTAGAGAAGTTTAAGAACCCAGCACTCTCTGATAAAACAATGGAGTTTGATCCAATCAGGCAGCACAGACACTTCTGCCCCTGGATTGCATCAATAAATGACGGGGAACCTGGGTGGAAACAAACATTATCTGCCCTGTATCATCAGAAAAATCAGCCGCCGCGTTCACCAAATAGATCTCCATTATCTCTTCCCATTGTTAAGGTGGATGATCCCGTGGGTTCAATCAGAAAGCTTTTCATGTCTCCATCAAGGAAGAGAATGAAGTCCACTCATATTACGGGGCAAAATACATAA 1965 0.4224 MVQDSEKRFHSIMDKLFHSPKPPSSSSSSGVQLSGSKKRPYQSGVMELNRRGDVAEGQQSSSAATTVLQGPLCRPWDRGDFMRRLATFKSMSWFAKPKVVSAVNCASRGWINVDIDTIACESCGARLLFSTPASWNQQQVEKAALVFSLKLDNGHKLLCPWIDNACNETLARFPPTTPEILVENFRQQCFALLQLSALPRISSSAVAYIQSQSPLMEDFLGQSLMLEYGNGSTQNSRIEDVSNQEELKLYYQAQKLISLCGWKLRPLPYVVDCKDMSDQSLKNATTLAIHSAGTDENKLDENSMDFIGEQVDPNSAVLDCTLCGATIGLWAFCTVPRPVESFRLVGYAEVNGENAFVAHNLLNKDDLENRQAARPDVANSSKDTSSSLNMTIAGGPPPTKQNFKAIISLPVIGQNLRARLSYDSNFRDHAFVNKGGSESNLQEITDNVIDASIGQLVPVSSETREIGDYETGSQARISDSDVIISTHHAGQSFALKDKMPTHTDADKLNTSAAGYHSSQKDSTEGEAVSVLHKTSDGKVGSDREEIPINSEDLHSSLEKFKNPALSDKTMEFDPIRQHRHFCPWIASINDGEPGWKQTLSALYHQKNQPPRSPNRSPLSLPIVKVDDPVGSIRKLFMSPSRKRMKSTHITGQNT* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00921 654 MobiDBLite consensus disorder prediction 12 42 - -
Lapu3g00921 654 MobiDBLite consensus disorder prediction 20 39 - -
Lapu3g00921 654 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 647 - -
Lapu3g00921 654 MobiDBLite consensus disorder prediction 505 528 - -
Lapu3g00921 654 MobiDBLite consensus disorder prediction 499 528 - -
Lapu3g00921 654 Pfam C3HC zinc finger-like 75 198 IPR012935 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00921 Lapu-Chr3 9940496 9946362 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00921 - - pvu:PHAVU_003G178600g 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00921 3 9940496 9946362 Lapu3g00921 3 9940496 9946362 ECH