Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00909 ATGGCGAAACCTCGCAAGCCCAAGAACAACGAAGACCCCAAGCCCGAAAACTCTGGTGCCCTAGTTCACCACCAAAAGCTATGCCTCTCAATCGACGTCGACAAACGCCTAGTCCACGGGTACACTGAATTGGAGATTGCGGTGCCGGAGATTGGGATCGTAGGGTTGCACGCGGAGAATTTAGGGATTGAGAGTGTTTGGGTCGACGGTGAGCCCACGGAGTTCGAGTATTACCCGCATCAGCAGCAGCAGGTGGAAGATGATAAGAGGTTTAGTTCTGTGTGTTCTCCTAGCTCTGCTGCCGATGCTGCTGTCTCAGTGTACATGTCCGCTCTGGAGAAGGAGCTGGTGCCCAATTTACTCATTAACTGCTGTAAACCTTCCAAGGTCGAAAGTGAACAACAGCAAGAGCAACCAGTTCCCGAGAACGGGTTTCATTCCACGGCTGAGCCCAAGCAGAATGTGAGAATTGTTCGTATTGACTATTGGATAGAAAAGGCAGAGACAGGAATCCACTTCAGAAATAATCTTCTTCATACTGATAATCAGATAAGGAGAGCAAGATGTTGGTTCCCTTGTATAGATGACAATTCACAACGATGCTGCTATGACCTGGAGTTCACCGTAGCACACAATCTTGTGGCTGTTAGTTCGGGATTTTTGCTCTATCAGGTCTTAAGCAAGGACAATCCTCCTAGGAAAACTTATGTCTATAAATTGGATGTTCCAGTTGCTGCTAGGTGGATATCTTTGGCTGTTGCCCCATTTGAAATTCTTCCTGATCACCAATTTGGTCTCATATCACATATGTGTTTGATGCCTAATCTGTCAAAGATGCGGAATACAGTGGAATTTTTCCACAGTGCCTTCAGCTGCTTTAAGGATTATCTTTCCGTAGACTTCCCGTTTGACTCATATACACAAGTTTTCGTAGAGCCAGAGATGGCAGTGTCTTCCTTGAGTTTAGGAGCCTCTATGAGTCTATTTAGTTCACAAGTTTTGTTTGATGAGAAGGTTATTGATCAGACTATTGATACAAGGGTGAAACTTGCATATGCTCTTGCAAAGCAGTGGTTTGGGGTGTATATCACCCCTGAGGCACCAAATGATGAGTGGCTCTTGGATGGACTTGCTGGTTTCATGACAGATTTTTATATTAAGAAACATTTGGGAAATAATGAGGCACGATACCGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCGACAGCTTTGAGCTGTTCAGCTGCCTGCAAAGATTTATATGGAACTCAGTGCATTGGTTTGTATGGAAAAATAAGATCATGGAAGTCTGTTGCTGTTCTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGCAGAATTCTACAAACGATAGTTTCTCGGGCTCAAGATAAAACGCGTTCCATGAAGACTTTAAGTACGAAAGAGTTTCGACATTTTGCCAATAAGGTTGGGAATCTTGAACGCCCGTTTCTTAAGGATTTCTTCCCACGGTGGGTTGGTTCATGTGGATGTCCTGTTTTAAGGATGGGATTTTCCTATAACAAAAGGAAGAATATGGTTGAATTGGCTGTGTTGCGAGGATGTACAGCATTGCAGACTTCTACTACATCCACTCTTGATATTAATCCAGAGACAGAAAATCGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCAATTCTGCCAATGGCTGGAGAAGCATGGCAACTATTGGAAATTCAATGTCACTCAAAGCTGGCTGCTAGACGCTTTCAGAAGCCTAAAAAAGGATTGAAACTTGATGGATCTGATGATAATGGTGACATTCCTTCCATGGATGCACGCTCAAATACTGAGTCCCCTTTATTATGGATCAGAGCAGATCCTGATATGGAGTACCTTGCCGAGGTTCATTTTAATCAACCGGTTCAGATGTGGATAAATCAATTAGAGAAGGACAAAGATGTTATAGCTCAGGCACAAGCAATTGCAGCCCTTGAGGCTTCCCCACAGCTATCATTTTCTATTGTGAATGCCCTAAACAATTTTCTCAGTGACTCCAAGGCCTTCTGGAGAGTACGGATTGAAGCAGCATTTGCATTGGCAAATTCAGCATCTGAGGAGACCGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTACAAGAGTCGAAGATTTGATCCTGACATTGGACTCCCAAAGCCAAATGATTTTCATGATTTTGCCGAGTATTTTGTTCTTGAGGCTATTCCACATGCTGTTGCCATGGTTAGAGCCGCTGACAAGAAAAGCCCAAGAGAGGCTATCGAGTTTGTTCTACAGCTATTGAAGTACAATGACAACAATGGGAACCCCTATTCAGATGTCTTCTGGCTTTCCGCATTAGTCCAATCAGTTGGTGAGCTTGAGTTTGGGCAACAGAGTATTCTCTTGTTGTCATCACTCCTCAAGCGCATTGACCGGCTTCTACAGTTTGATAGTCTCATGCCAAGGTACAATGGAATCTTGACTATCAGTTGTATCCGAACATTGACCCAGATTGCTTTAAAGCTTTCGGGGTTTATTCCTCTTGAACGAGTTTATGAACTTGTAAAGCCTTTTCGTGACTTCAAGACTTTGTGGCAAGTTCGAATTGAAGCAAGCAGAGCACTTCTTGATCTTGAATTCCACTGCAAGGGCATGGATTCAGCATTGCTTCTATTTATCAAATACATAGAGGAGGAGCATTCCTTAAGAGGACAGTTAAAACTAGTCACCCATGTGATGAGACTATGTCAGATGAGGGATGGATTGAATTCAGATGAGGAAATTGCAAGCCAAACTCTTGTCTCTATGCTTAATTTACTGGAAGGGCGTACTGCTTTTAATAACGTCTTTCTCCGGCATTACTTGTTCTGCATACTACAAATACTTGCAAGAAGACCACCAACTCTTCATGGGATTCCCAGGGAAAATAGAACGTTGCATATGAGTCTTACAGAAGCTTGTAACTATCAGAAGAACATGTTTGTTCTTGATTCTGATAGCAAACCTTTGGATCTGCCAAGCTCTACCCTAAACCCTACACCAAATCTTGACCTGGAGGGTTTGAGGGATGCACTCGATGAAGTTTCTAAGGACCATCCTGGTGAAGCTCCCACACAGGTACACATTGAAGCTCTAATGGAAGCGCCCTTAGAGAAACCCGAAGAAGTATTTACTGAATTTCCACAGGAAGCACCAATGGAAGCTCCAAATGAAGTTTCCAAGGAAGCTGATACTGTATCCAATAGCCATGAAAGAAAGAGGCTCATTAAAATCAAGGTCAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAAGTGGTTGAACGTTCTTTAGGTGGTCGTAATGAAATGGATCATGGAGCTAGCAGTTCAGTTTCTGTGGATGCACCACAGAGGAATTTTGCCGAGACTCTTAGCATCAGTAATCACAATATAGACGAAGTTAATTCTTGGCATGATCGTGGTTCGCGCATGACTGCTAGCATTGGTAGTGCAAAATTTTTGAGTGACGGTGATGAATTGGTCAAAGAACTCCAGTGCACTGCTGATTCAAGTATAGTTTATTCACAACCTCAGCCAGAAGATCCATCATCATCCAGTATTATCCAGGATAACAATGTAGATGCTGATGCACGACGATATGCCAGCCTTCAAACTCTTTCAGTTGCAAGATTTGATCCTGACGGAGAATCATTAGGTAAAGAAATTTCTGCTCGCGGCAAGGAAAAGCACAAAAGCAAGGAAAAGAAACGGAAACGGGAAAGTAATAAAGGACACCATGATGATCCAGAATATTTAGAGCGAAAACGATTAAAGAAGGAGAAAAAACGACGGGAAAAAGAAATGGCAAAACTTCAGAGTGATGAATCGAAGAGATCCTCTGTAGACTTGTCGAGTAAGAAAGAGGAACCTGTGGTGGATGTTGCTAGACAGGTTAAATCTGTTGAGCCCAGCGGATATAATTCTAAATTAGAAACCAAAAAGATTGATACCAAACCGGATCCATCTGAAGGCACATCTGGTGCACCAAAAATTCGAATTAAAATTAAAAACCGAATGCTCAACAAGTCATAG 4152 0.4273 MAKPRKPKNNEDPKPENSGALVHHQKLCLSIDVDKRLVHGYTELEIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPHQQQQVEDDKRFSSVCSPSSAADAAVSVYMSALEKELVPNLLINCCKPSKVESEQQQEQPVPENGFHSTAEPKQNVRIVRIDYWIEKAETGIHFRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAHNLVAVSSGFLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFGLISHMCLMPNLSKMRNTVEFFHSAFSCFKDYLSVDFPFDSYTQVFVEPEMAVSSLSLGASMSLFSSQVLFDEKVIDQTIDTRVKLAYALAKQWFGVYITPEAPNDEWLLDGLAGFMTDFYIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCSAACKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSTTSTLDINPETENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKLDGSDDNGDIPSMDARSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLSALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPRYNGILTISCIRTLTQIALKLSGFIPLERVYELVKPFRDFKTLWQVRIEASRALLDLEFHCKGMDSALLLFIKYIEEEHSLRGQLKLVTHVMRLCQMRDGLNSDEEIASQTLVSMLNLLEGRTAFNNVFLRHYLFCILQILARRPPTLHGIPRENRTLHMSLTEACNYQKNMFVLDSDSKPLDLPSSTLNPTPNLDLEGLRDALDEVSKDHPGEAPTQVHIEALMEAPLEKPEEVFTEFPQEAPMEAPNEVSKEADTVSNSHERKRLIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFAETLSISNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNVDADARRYASLQTLSVARFDPDGESLGKEISARGKEKHKSKEKKRKRESNKGHHDDPEYLERKRLKKEKKRREKEMAKLQSDESKRSSVDLSSKKEEPVVDVARQVKSVEPSGYNSKLETKKIDTKPDPSEGTSGAPKIRIKIKNRMLNKS* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00909 1383 Coils Coil 1292 1317 - -
Lapu3g00909 1383 MobiDBLite consensus disorder prediction 1304 1330 - -
Lapu3g00909 1383 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 275 517 - -
Lapu3g00909 1383 MobiDBLite consensus disorder prediction 1247 1330 - -
Lapu3g00909 1383 MobiDBLite consensus disorder prediction 1088 1156 - -
Lapu3g00909 1383 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 254 IPR042097 -
Lapu3g00909 1383 Gene3D Neutral Protease Domain 2 265 512 IPR027268 -
Lapu3g00909 1383 MobiDBLite consensus disorder prediction 1281 1296 - -
Lapu3g00909 1383 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1303 IPR037813 GO:0005669
Lapu3g00909 1383 FunFam Transcription initiation factor TFIID subunit 2 109 253 - -
Lapu3g00909 1383 MobiDBLite consensus disorder prediction 1254 1268 - -
Lapu3g00909 1383 CDD M1_like_TAF2 24 508 - -
Lapu3g00909 1383 MobiDBLite consensus disorder prediction 1342 1383 - -
Lapu3g00909 1383 MobiDBLite consensus disorder prediction 1213 1232 - -
Lapu3g00909 1383 Pfam Peptidase family M1 domain 284 481 IPR014782 GO:0008237|GO:0008270
Lapu3g00909 1383 FunFam Transcription initiation factor TFIID subunit 261 512 - -
Lapu3g00909 1383 SUPERFAMILY ARM repeat 456 986 IPR016024 -
Lapu3g00909 1383 Gene3D tricorn interacting facor f3 domain 20 253 IPR042097 -
Lapu3g00909 1383 MobiDBLite consensus disorder prediction 1117 1135 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00909 K03128 - gmx:100792795 2488.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00909 3 9834463 9856277 Lapu3g00909 3 9834463 9856277 ECH