Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00749 ATGGACGCCGCAGCAACAGGTTCTGTGCTGAACAAGTCCGGGAGCGGAGGTTCGGAGCGGAGCGATGACAGCGGAGGAGGGATATTTGAGTACTCTGGCTGGGTTTACCACTTGGGAGTCAATTCCATTCGCCATCAGTACTGTCATCTTCGATTCCTCTTGATTAGGGGAAAGTATGTCGCTATGTACAAGCGTGATCCTCACGAAAACCCTGGCATCAAACCAATTAGGCGGGGAGTTGTTGGACCCACGCTAATGGTGGAGGAGCTAGGTCGTCGAAAGGTCAACGATGGGGATCTTTATGTTTTACGGTTTTACAATCGATTAGATGAGACCAAAAAAGGAGATATTGCTTGCGCTACAGCTGGGGAGGCCAGGGGATGGATGGAAGCATTTGATCAGGCTAAGCAGCAGGCTGAGCATGAGCTGTCAAGAGGAATTAGTGCCAGAGACAAACTAAACATGGAGAACGAGATTAATCTTGAAGGACATCGACCTAGAGTGAGGCGATATGCCCATGGTTTGAAGAAGCTTATAAGAATTGGCCAAGGCCCAGAGAAATTGTTACGACAATCATCAATGTTGTCTTCTAGAACAGATGTGTTTGAAGGGGATGGAGGAGATGCAGTTGAAGCACATCAATGGAAATGTGTTCTTACTTTGGCTGGTATTAGAATTTTTGAGGATGTTTCTGATCACAAGAATGGTAAAACTGTCCTTGCAAAGTCTGTTGGTGTTATTGATGCAACTGCAGATACTGTTTTTGAAGTTATTTTGTGCACTGAGCAACAGAAAAGATATGAGTGGGATACATTGATATGCGACTTGGAGCTTGTAGATTCATATGACGGACACTACGATGTTGTTTATGGGACATATGATTCTAAGTATCTATCTCGGTGGCACTCAAAGCAGGATTTTGTCTTCTCTAGACAATGGTTTCGTGGACAAGATGGAACATATACCATCTTGCAATGTCCAGCTATACACAAGAAAAAGCCTCCAATATCCGGATACCGACGTGCAAAAGTTAATCCATCTTCATGGGAGATTAGAAATTTGAACACATCTGTGACATCAAATAGTCCAAGATGTTTAGTGACCCACACTTTAGAGATAGACTCTTCGTCCTGGTGTCGATGGAAGAACAACCAGAACTCAAAATTTCAGAGGAGCATTCCACATGCATTGTTGTTCCAAGTGGCAGGTCTGAAGGAATACATTGCTGCCAATCCTGCACTCCACCATGAAAATGCCACCACTGTTGTTCATTCCAAAATCTCCGATGCTTCTATTTCTAGTGCTGAATGTGAGGATGAAATGCAGGATGAGTTTTATGATGCAATTACTGCTGATTCATCAACATCTGATGACGAAAGTGATGATGATCAAAAACTTGTTCTGCAGGAGCCAAGAGTCAAGCTAAAGAATATTTCATGGGCAATTACAACATTAGCTTTAAAGCGAACAGCAGCTCCCGATTTAAGCGAAGAATTGGATCCTCATGTAACTCCTATCACAATTCCAAGTGATTTGCATGGTTCTTTAAGGAAAGGAAAGGATGACAGTGACACAAACTGTTGGGCTTCTCCTACTGGAAAAGGATTTATGATTAGAGGAAAGAACTATCTTAAAGATAGTTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAACTTGTAGGAGTCGATTGGTTAAGAGTTGATAAATCTGTAGATAGAATTGCTCTTCACCCTAAATGCTTGGTTCAGTCAGAAGCCGGCAAAAAGCTTCCATTTATCCTTGTCATTAATCTCCAGGTTCCTGCTAAACCAAACTACAGTCTGGTTCTATATTATGCAGCTGACAGACCGATAAATAAAAATTCTTTGTTAGCTAAGTTTGTTGGTGGAAGCGATGCGTTTCGGGACTCAAGATTCAAGCTTATTCCAAGTATAGTTGAGGGATATTGGATGGTGAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTGGGAAAAGCTGTAACCTGTAAATACTTTAGACAAGATAATTTTTTGGAGATTGATGTGGACATTGGATCATCTTCTGTAGCCAGAAGTGTCATAGGCCTTGTTCTGGGATATGTTACAAGTCTTGTTGTTGACCTTGCAATTTTGATAGAGGCAAAAGAAGAGCCGGAGTTGCCGGAGTACATTCTTGGAACTGTACGATTAAACCGTTTGAAACTTGAATCTGCTGTACCATTGGAACATTAA 2232 0.4216 MDAAATGSVLNKSGSGGSERSDDSGGGIFEYSGWVYHLGVNSIRHQYCHLRFLLIRGKYVAMYKRDPHENPGIKPIRRGVVGPTLMVEELGRRKVNDGDLYVLRFYNRLDETKKGDIACATAGEARGWMEAFDQAKQQAEHELSRGISARDKLNMENEINLEGHRPRVRRYAHGLKKLIRIGQGPEKLLRQSSMLSSRTDVFEGDGGDAVEAHQWKCVLTLAGIRIFEDVSDHKNGKTVLAKSVGVIDATADTVFEVILCTEQQKRYEWDTLICDLELVDSYDGHYDVVYGTYDSKYLSRWHSKQDFVFSRQWFRGQDGTYTILQCPAIHKKKPPISGYRRAKVNPSSWEIRNLNTSVTSNSPRCLVTHTLEIDSSSWCRWKNNQNSKFQRSIPHALLFQVAGLKEYIAANPALHHENATTVVHSKISDASISSAECEDEMQDEFYDAITADSSTSDDESDDDQKLVLQEPRVKLKNISWAITTLALKRTAAPDLSEELDPHVTPITIPSDLHGSLRKGKDDSDTNCWASPTGKGFMIRGKNYLKDSSKVVGGDPLLKLVGVDWLRVDKSVDRIALHPKCLVQSEAGKKLPFILVINLQVPAKPNYSLVLYYAADRPINKNSLLAKFVGGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIEAKEEPELPEYILGTVRLNRLKLESAVPLEH* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00749 743 ProSiteProfiles START domain profile. 215 374 IPR002913 GO:0008289
Lapu3g00749 743 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 528 733 IPR009769 -
Lapu3g00749 743 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 45 742 IPR045096 -
Lapu3g00749 743 Gene3D - 208 419 IPR023393 -
Lapu3g00749 743 MobiDBLite consensus disorder prediction 1 23 - -
Lapu3g00749 743 Pfam START domain 237 378 IPR002913 GO:0008289
Lapu3g00749 743 SUPERFAMILY Bet v1-like 209 378 - -
Lapu3g00749 743 CDD START 211 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00749 Lapu-Chr3 7920764 7945030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00749 - - gmx:100780025 1344.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00749 3 7920764 7945030 Lapu3g00749 3 7920764 7945030 ECH
Lapu3g00749 3 7920764 7945030 Lapu9g00238 9 2315361 2339889 PCT