Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00561 ATGTTCAATTTCTTACTTAGAAAAGACGTTCGAAAGATTCTCAAGCGCAAAGATAGCGATGCTGGGGAGAGAGGCAGAGCACTGGAAGACCTTAGAGGCTCACTCTTTAATGAATTTCGTTCCCCTGAAGGTGCAAAACGACAACAACATCGTACATGTGGTCCAGCTGCAGCACTTGCCTTTAATTTTGTAGTTGCAATTAGTATTATCTTCATGAACAAAATGGTTCTTCAAACTGTTAAATTCAAATTCCCTATTCTTCTCTCACTAATTCACTATGTAGTGAGCTGGCTCTTAATGGCTGTATTAAATATGTTTTCTTTGCTTCCTGCATCTCCTTCCTCAAAATCAACTAAGCTGTCTGCTTTATTTACTCTTGGATTTGTCATGTCTCTGTCTACTGGCCTGGCTAATGTCAGCTTGAAGTATAATAGTATTGGTTTCTATCAGATGGCAAAGATTGCAGTAACGCCTTCAATAGTTATGGCAGAATTTGTATTGTATAGGAAGAAAGTTTCTTGGCCCAAGGCTTTTGCATTAACGGTGGTATCTATTGGTGTTGCTGTGGCTACAGTGACAGATCTGCAGTTCCATTTCTTTGGTGCCTGTGTTGCATTAGCGTGGATTGTACCTAGTGCTGTAAACAAAATCCTCTGGTCCAGATTGCAGCAGCAGGAAAACTGGACTGCTTTGGCGTTGATGTGGAAAACAACACCTATTACTTTAATTTTTCTTGCTGCTATGTTACCCTGCTTAGATCCTCCCGGTGTACTTTCCTTTGATTGGAACTTCATTAACACATTGGTGATACTCACATCAGCCATTCTTGGATTTTTGCTTCAGTTATCTGGGGCTTTGGCACTAGGTGCTACATCTGCGGTCTCGCATGTTGTTCTTGGGCAGTTTAAGACATGCATTATCCTGTTGGGAAACTATTATATCTTTGGATCCAATCCTGGCATAATCAGTATCTGTGGGGCATTTGCAGCTATTGTTGGTATGTCTGTTTACACTTGCCTTAATCTGAAGCAGCAAACAGCCAAGATATTTCCTCACCAGACCTCCCTTTTACCAAAATCTAAACTAAGCAAAGAAAATGGCAGTTTCCATAATGGACTTTACAGTGCAGAAAATGTCTAA 1140 0.4053 MFNFLLRKDVRKILKRKDSDAGERGRALEDLRGSLFNEFRSPEGAKRQQHRTCGPAAALAFNFVVAISIIFMNKMVLQTVKFKFPILLSLIHYVVSWLLMAVLNMFSLLPASPSSKSTKLSALFTLGFVMSLSTGLANVSLKYNSIGFYQMAKIAVTPSIVMAEFVLYRKKVSWPKAFALTVVSIGVAVATVTDLQFHFFGACVALAWIVPSAVNKILWSRLQQQENWTALALMWKTTPITLIFLAAMLPCLDPPGVLSFDWNFINTLVILTSAILGFLLQLSGALALGATSAVSHVVLGQFKTCIILLGNYYIFGSNPGIISICGAFAAIVGMSVYTCLNLKQQTAKIFPHQTSLLPKSKLSKENGSFHNGLYSAENV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00561 379 PANTHER SOLUTE CARRIER FAMILY 35 58 339 - -
Lapu3g00561 379 Pfam Triose-phosphate Transporter family 60 337 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00561 Lapu-Chr3 5694949 5700558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00561 67 363 Organic Solute Cotransporters AT1G77610 25.890 6.19e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00561 - - pvu:PHAVU_003G139700g 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00561 3 5694949 5700558 Lapu3g00561 3 5694949 5700558 ECH
Lapu3g00561 3 5694949 5700558 Lapu9g00455 9 4898895 4903841 PCT