Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00516 ATGGCAACATCTAGCAAGTTTGATCCGTCTTCCAGTAGCCCAGATAGACCATTGTACCCTGGGCAACGTGGATCCCACATAGCTGCTTCATTAGATAGATCAGGTAGCTTTCGGGAAAGCATGGAAAATCCAATTCTGTCTTCTCTTCCTAACATGTTAAGAAGCAGTTCTCCCGCAACACATGGGGATGTGGAGAACTTCTTCAATTATGTGCATTTTGATCCAAAGTTGTTAACACTAGAGCATAAGTCTAATCGTCAAATGGATTATAAGCGACATGTTAATGCTGCTCTTGGAATTTCACCTGATGAATCTCCATCAAGTTCTTCAAAAGGCAAGCTACTGGCATCACCAGTACCAGAAGACTTGAAACGGCTCAAGGATGTTTTGGGTGTAAATGCAACGAGGGCAAGGGAACGTGTGAAAATGTTTAGTGATGCTTTATCAGTATTTCATGAAGTTTTCCCAACTATAACTTCAAAGAAAAGATCTCGAGCTGAGAGTTTTTCTAATGACCGTTCTAATTCCATGACAAGTGATCGGCCAGTCTTGGGGTCAAGTATGGGTAAGGGTGTTCAAGGTCATCCTGTGACAGGTGGTTTTGAACTTGAGCAACAAAAGTCAGAAGAAAGAACCAAAAATGTTGTTCCAAACAAGCGAACTCGAACTTCTATGGTTGATGTAAGGATGGATGTGCGGACTAATTCTCTTGTCAGGCCATCAGGCACAGTTGACAGAGACAAGGAAAAGTTACGGATTGCCAACAATGGTGTAGTTCAGAGTGAAGAACGAACCTTACCTATTGTTGGTGATGGCTGGGAAAAGTCAAAAATGAAGAAGAAGCGCTCCTGCATCAAACTGGATGGTTCTCCAAGTACAACATTGACTAAACCTGTTAACACCTTCCAAGAAACTAAACAGGGAATGCAACAAAGACTTGTTACTGATTCTCGGTCAAAGTTGAGTAATGATTCTCATTCTTTCAGGCCAGGAGTTTCTAATGGATCTGTTGGGGTGGGCAAATCAGATGGTACCTCTCAACAGGGCATACGAGCCTCTACCCCCAGAAACAACCAAGATAACAATTCCCCTGTCAATGATAGGCGAGGTCGCCCTGTTGGTTCAGACAAGGAAAGGGTGAATTTCAGAGCTGTAAACAAGGCAACTGCACGTGATGAGTTTAATTCAGCTAGTCCTACTGCTAGTGCAAAAATGAACACTGCTATACGGGCTCCGCGGTCTGGTTCTGGAGTTGCCCCCAAGTTGTCACCAGTTGTTCATAGAGCAGCTGTTCCTAACGATTGGGAACTCTCTCACTGTGCTACAAAGCCACCTGCTTCTGCTAACAATCGTAAGCGTGTGGCTTCAGCACGATCATCTTCCCCACCTGTTGTCCCCTGGCAGAGACCACAAAAGAGTTCTCGCACTGCTAGAAGAACAAATTTCATGTCTATTGTTTCTAATAATGATGAATCTCCAGCTTTGGATACTGCATCTGATGTGGCTGGTAATGATCTTGGGTTAGGATTTTCCAGGCGCTTGGTGGGCAGTTCTACCCAGCAAATTAAATTAAAAGCTGATCCTTCATCTTCAGCTGCCTTATCTGAAAGTGAAGAGTCAGGGGTGGCTGACACTAAACCAAAAGAAAAGGGTAGGAAGCCAGAAGAGATAGATCAGAAAGCTGGACAAAACGTGCAAAAGGTGTCTAACCTGGTATTACCAACAAGAAAGAATAAGCTTGTTTCTGAAGAACATGGAGATGGTGTTAGAAGGCAAGGGAGGACTGGACGCAGTCTTACTGCCACAAGGTCACTGATGCCAATGACATCTGAGAAGCTTGGGAATATTGGAACTGCAAAACAACTTAGAAGTGCAAGACTGGGATCTGATAAGAATGAAAGCAAGGCAGGTCGTCCACCATCCAGGAAACTTTCTGATCGCAAGGCCTATGCACGTCAAAAGCCTGCCACTAATGCAGCCACAGATTTTTTTGTTGGGTCAGAAGATGGGCATGAAGAGCTGCTGGCTGCTGTAAAGAGTGTAATAAACTCTGCTCATACTTTTTCCAGCCCCTTTTGGAGGCAGATGGAGCCTTTCTTTAGTTTGATAACTGAGGAGGATATTACTTACTGGAAGCAAAAGGTAAATCTTGAACCAGGCACGCTGATTCCAACTCCCATTCCTTCAAATACAGATGGCTGTGAAACCATTTTTAATGGATATGGGTTGACAGCCTGTGAAAGAGACTCTGGATCTGATGCTCAATGGAATGCTGGAATTATTGAAGAACAATTGCAACTGTCTAAGGGAGACCATAATATGATTCCTCTGTGTCATAGGCTTGTAGCAGCTTTAATCTCAGAGGAGGAGTGTAGTGGTGGAAGTGAACAATTCAAGTTTGATGCTTATGATTCTGAATTTGACCCTGATGGGCAAGCAGATTTGAGTGGTTTGGATTACCACTCAGGAACAAATTTTCAGTTTGCTTGTCATTCTGCTTCTAATGGTTATAGGATTATAGACAAGCCAGAACATGATGTGACTGAAAGTGATATTGTTGGTATTCCTCCCACTGGGTTGAATTCAAGCTTTGGTAAATCTGTAAATGGTTTTCTCCATGATAAGGCATCAATGTCGAGCTTCACCTGTTCAGAGATGCAATATGATAGTTTGGATATAAATGATAAGATTCTCTTGGAGCTTAAAAGCATTGGAATTGCCCCGGTACCAGTGCCTCATATGTTGCAACCAGATGATGAAGGAATATTGGAGGATATTACTAGGTTGGAGGAGCTTTATCAAGGACAGATTTCAAAGAAGAAAAGCTTGCTAGATAGATTGTTCAAAGCTGCCTCAGTGGATAAAGAACTTCAAGAAAAGGATTTTGAGCAACGTGCTCTAGATAAACTTGTTGTGATGACATATGAGAAGTACATGGCTAGTTGGGGTCCTAGTCCCTCCGGTGGGAAAAATACGAGCAACAAAATGGCCAAGCAAGCTGCATTGGGATTTGTCAAACGGACATTGGAGCGATGCCATCAATTTGAAGAAACTGGCAAAAGCTGCTTCAGTGATCCTTTATTCAAGGATATGTTCCTTGCTGAATCTTCAAAGCCTCATGCTTCTTCCCTTTCTGTGGAAGCAAGAACAGCTTCCATGGGTTCACAACAGAGTCCGTCTCAGTTTAGTCAGAATATGGATAATCATGACCTCCATTCATCAGATATGCTTCCTGCTTTAAATCATTCATCTGAGCAAATTAGTGGGAAGGAAGATCTCTGGTCAAACAGAGTGAAGAAGAGGGAATTGTCCCTTGATGATGTTGGTGGTACTCCTGGTATTTCTAGTGCTCCAGGCATAGGAAGTTCTGTGACAAGCAGTGCAAAAGGAAAGAGGAGCGAGAGAGATAGAGAGGGAAAGGGTCACAGCAGGGAGGTACTATCTAGAAATGGAACTACGAAAGTTGGTAGGCCAACATCATCCAGTGCTAAGGGTGATAGAAAATCCAAAACAAAGCCTAAGCAGAAAGCAACTCAGAATTCAGTTTCTGTGAATGGCCTCCTTGGGAAGTTATCAGAGCAACCAAAACCAGCATTATCTTCTGTTCCAAAGTCTAATGAACTGCCTACAACTAGCAATACAAAGGAAAAGGATGAATTTGGCTTGGGTGGATTGGATGATCATGAGCCTATTGATTTGTCCAACCTGCAGCTACCTGGAATGGATGTACTAGGTGTTGGTGATGACCAAGGTCAGGATCTTGGTTCATGGTTGAATATTGATGATGATGGATTACAAGATCATGATGACTTTATGGGCGGCCTTGAAATTCCAATGGACGATCTATCGGACTTGAATATGATAGTTTGA 3870 0.4297 MATSSKFDPSSSSPDRPLYPGQRGSHIAASLDRSGSFRESMENPILSSLPNMLRSSSPATHGDVENFFNYVHFDPKLLTLEHKSNRQMDYKRHVNAALGISPDESPSSSSKGKLLASPVPEDLKRLKDVLGVNATRARERVKMFSDALSVFHEVFPTITSKKRSRAESFSNDRSNSMTSDRPVLGSSMGKGVQGHPVTGGFELEQQKSEERTKNVVPNKRTRTSMVDVRMDVRTNSLVRPSGTVDRDKEKLRIANNGVVQSEERTLPIVGDGWEKSKMKKKRSCIKLDGSPSTTLTKPVNTFQETKQGMQQRLVTDSRSKLSNDSHSFRPGVSNGSVGVGKSDGTSQQGIRASTPRNNQDNNSPVNDRRGRPVGSDKERVNFRAVNKATARDEFNSASPTASAKMNTAIRAPRSGSGVAPKLSPVVHRAAVPNDWELSHCATKPPASANNRKRVASARSSSPPVVPWQRPQKSSRTARRTNFMSIVSNNDESPALDTASDVAGNDLGLGFSRRLVGSSTQQIKLKADPSSSAALSESEESGVADTKPKEKGRKPEEIDQKAGQNVQKVSNLVLPTRKNKLVSEEHGDGVRRQGRTGRSLTATRSLMPMTSEKLGNIGTAKQLRSARLGSDKNESKAGRPPSRKLSDRKAYARQKPATNAATDFFVGSEDGHEELLAAVKSVINSAHTFSSPFWRQMEPFFSLITEEDITYWKQKVNLEPGTLIPTPIPSNTDGCETIFNGYGLTACERDSGSDAQWNAGIIEEQLQLSKGDHNMIPLCHRLVAALISEEECSGGSEQFKFDAYDSEFDPDGQADLSGLDYHSGTNFQFACHSASNGYRIIDKPEHDVTESDIVGIPPTGLNSSFGKSVNGFLHDKASMSSFTCSEMQYDSLDINDKILLELKSIGIAPVPVPHMLQPDDEGILEDITRLEELYQGQISKKKSLLDRLFKAASVDKELQEKDFEQRALDKLVVMTYEKYMASWGPSPSGGKNTSNKMAKQAALGFVKRTLERCHQFEETGKSCFSDPLFKDMFLAESSKPHASSLSVEARTASMGSQQSPSQFSQNMDNHDLHSSDMLPALNHSSEQISGKEDLWSNRVKKRELSLDDVGGTPGISSAPGIGSSVTSSAKGKRSERDREGKGHSREVLSRNGTTKVGRPTSSSAKGDRKSKTKPKQKATQNSVSVNGLLGKLSEQPKPALSSVPKSNELPTTSNTKEKDEFGLGGLDDHEPIDLSNLQLPGMDVLGVGDDQGQDLGSWLNIDDDGLQDHDDFMGGLEIPMDDLSDLNMIV* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 441 480 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 1105 1228 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 305 381 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 162 216 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 393 420 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 562 576 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 1211 1226 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 393 409 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 305 368 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 595 617 - -
Lapu3g00516 1289 PANTHER OS05G0107300 PROTEIN 1 1289 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 578 592 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 452 480 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 1039 1076 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 1129 1147 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 626 650 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 1 18 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 541 560 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 517 654 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 1 35 - -
Lapu3g00516 1289 MobiDBLite consensus disorder prediction 517 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00516 Lapu-Chr3 5249029 5261137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00516 - - gmx:100805358 2206.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00516 3 5249029 5261137 Lapu3g00516 3 5249029 5261137 ECH
Lapu3g00516 3 5249029 5261137 Lapu9g00415 9 4381683 4395665 PCT