Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00498 ATGGAGGGTGACACATTCTCTGGTCTCGGCAACGGTACACAGATTGATAACAAGATCTTGCAAACATTTAAGAAAAGCTTTGTTCAAGTCCAGGACATCTTGGATCAGAACCGGGTACTCATCAATGAGATAAACCAGAATCATGAGTCCAAGGTCCCTGACAACCTCAGCAGAAACGTTGGCCTTATTAGGGAACTTAACAACAACATCAGAAGAGTGGTTGACCTTTATGCGGATCTTTCAAGCTCCTTTACCAAATCCATGGAGGTTTCTTCCGAAGGGGATTCCAGTGGTGCTGTGAAATCTGACGGCAAAGCTGGCCACAAGCGACACAGGCCTCTTTAG 345 0.458 MEGDTFSGLGNGTQIDNKILQTFKKSFVQVQDILDQNRVLINEINQNHESKVPDNLSRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEVSSEGDSSGAVKSDGKAGHKRHRPL* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00498 114 PANTHER PROTEIN ELF4-LIKE 4 12 112 IPR040462 GO:0042753
Lapu3g00498 114 Pfam Early Flowering 4 domain 14 95 IPR009741 -
Lapu3g00498 114 MobiDBLite consensus disorder prediction 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00498 Lapu-Chr3 5105080 5107507 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00498 - - gmx:100817992 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00498 3 5105080 5107507 Lapu3g00498 3 5105080 5107507 ECH
Lapu3g00498 3 5105080 5107507 Lapu9g00399 9 4245447 4247399 PCT