Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00472 ATGGCGGAGGATTTCTCCAAGGCGGTAGACGACGGACTGAAGCTCTCCAAGCGTATATACTTCGGGAAGGACAGGGCGGTGGCGCCGCCGAAAACTCCGCCGCCGATGGTCCGCTCCGCCACGGCGTTCCTCCCTTCCGCGGCGATGGTCTACGCGGTGATCTGCGATCCAGGAATCGTTGACAACCCCGACATCCCTAGCTACCAGCCGCACGTGCACGGCAGGTGTGATCCTCCGGCGCTGATTCCGCTTCAGATGAACGCAATTGAGATGGAAGCTGACTGTCACCACGACACCGCCTTTATCACCGTTTCCGGTACTTGGAGACTGCACTGCATCAAGGGAAGCCGTTCCTGCGATTGCCGTATCGCTATTCCAATGGGCATCCAGGGTTCAATTCTAGGTGTCGAGGTTAGCTTGCCTAGAAAATCATATTCTACTGAACTGGTTGTTATGGAAGATGACAAAGGGAACCAAAACTTCGCGCCACCTCAAAACGGAGGGTTTCTCATCCCTAATATATTTACTTTAACTATACCACAGATTGATGGGGGTTCCAACTTGTCGATCAAAGTTCGTTGGTCTCAGAAAATAGTGTACTCCGATGGTCGGTTCTCTTTGAATGTGCCGTTTAACTTTCCTGATTTTGTTAACCCTGCGGGGAAGAAGATACGTAAAAGAGAAAAGATACGAATGAATTTGGATGCTGTTACCGGAGGTGAGCTTCTGTGCAGGAGTATAAGCCACCCAATGAAGGAAGTGAGTCGTCATGCGGGTAATATGGGCTTCTTGTATGAGTCTGATGTTCTCTCGTGGTCTACAGTTGATTTTAGCTTTTCATACGCTGTTTCTTCAAGTCATATAACTGGTGGTGTTCTTTTGGAATCTGCATCCGGGCATGATCTTGATCAAAGAGAAATGTTCTACATGTATCTTTCTCCAGGAGATATGCAAAGTGAGAAGGTATTCAAAAAGGAAATAATATTCCTTGTTGACATCAGTGGTAGCATGCAGGGAAAGCTAATTCAAGACACAAAGAATGCACTGTTGGCTGCTCTCTCCAAGCTTAATCGTGACGATTCATTTAATATTATAGCCTTTAATGGAGAGACTTATCTGTTTTCCAAATCGATGGAAGTGGCTTCCGAGGTTGCTGTTGAAAGGGCCACTGAGTGGATTAACCTGAACTTTGTTGCTGGAGGTGGTACAAATATTTCACGCCCATTAAACACGGCATTAGAGATGCTATCCAATGCTCAAAGTTCAGTTCCAATAATTTTCCTAGTTACAGATGGAACTGTTGAAGATGAGAGACAAATTTGTGCAATGGTGAAGAATCGTATGATCAATGGAGAGTCAATATGCCCTCGAATTTACACTTTTGGCATTGGTTTATTCTGCAATCATTATTTCTTGCGGACCCTTGCAGTGATTAGCAGGGGCCAATACGATGCTGCAATGGATGTTGATTTGATTGAGCCTCGAATGCTGACACTGTTTGACAAAACTTCATCTCTCATTCTTGCAAATATCAAAGTGGATTCATTCGATGATATTGGTGAACTCGAGGTATTCCCTTCTCATATTCCAGATCTTTCATCAGAGGGTCCGTTGATTTTGTCTGGAAGATACAGGGGAAATTTTCCTAAAACTCTTAAAGTCGAAGGTATTTTGGCTGATTTCAGTAATTTTGTAGTAGATATGAAGATACAGAATGCTAAGGACATGCCTGTACAAACGGTTTCTGCAAGAAATCAAATAGAGCATCTTACCGCTCAAGCATGGTTTGTGGAAAATAAACAGCTAGAACAGAAGGTTGCAAAACTGAGCCTGCAGACGGGCTTTATCTCCGAGTATACACGAATGGTTTTACTTGAGACCGATCATCTAAAGAAAGTCAAGGAATCAGCCGGAAAGAAAGAAGCGTCAAAAAAGAGCAATAGTCAGTTGGAGGCACCCGTCCAAGGCCAGAGAATGATTTTACTACCACATTTGGGTATTGGCTTTGGCAACTTAACTGCAACTGCTGAAAATACTCCTCCCGGATATGAGTCGAAGTTGCCTGAAGTTCCTGAAATCTTTAAGGCGGCCACAAATTGTTGTGAAACGATGTGCAGTTACTGCTGCTGCATGTGCTGCATCCAGTGCTGTACCCGGTTAAACAACCAATGTGCAACTGCATTGACACAACTCTGCATTGGTCTAGGATGCTTTGGATGCATCACTTGTTGTTCAGAAATATGCTGTTCAGGAAACGAAGGCTGA 2265 0.4459 MAEDFSKAVDDGLKLSKRIYFGKDRAVAPPKTPPPMVRSATAFLPSAAMVYAVICDPGIVDNPDIPSYQPHVHGRCDPPALIPLQMNAIEMEADCHHDTAFITVSGTWRLHCIKGSRSCDCRIAIPMGIQGSILGVEVSLPRKSYSTELVVMEDDKGNQNFAPPQNGGFLIPNIFTLTIPQIDGGSNLSIKVRWSQKIVYSDGRFSLNVPFNFPDFVNPAGKKIRKREKIRMNLDAVTGGELLCRSISHPMKEVSRHAGNMGFLYESDVLSWSTVDFSFSYAVSSSHITGGVLLESASGHDLDQREMFYMYLSPGDMQSEKVFKKEIIFLVDISGSMQGKLIQDTKNALLAALSKLNRDDSFNIIAFNGETYLFSKSMEVASEVAVERATEWINLNFVAGGGTNISRPLNTALEMLSNAQSSVPIIFLVTDGTVEDERQICAMVKNRMINGESICPRIYTFGIGLFCNHYFLRTLAVISRGQYDAAMDVDLIEPRMLTLFDKTSSLILANIKVDSFDDIGELEVFPSHIPDLSSEGPLILSGRYRGNFPKTLKVEGILADFSNFVVDMKIQNAKDMPVQTVSARNQIEHLTAQAWFVENKQLEQKVAKLSLQTGFISEYTRMVLLETDHLKKVKESAGKKEASKKSNSQLEAPVQGQRMILLPHLGIGFGNLTATAENTPPGYESKLPEVPEIFKAATNCCETMCSYCCCMCCIQCCTRLNNQCATALTQLCIGLGCFGCITCCSEICCSGNEG* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00472 754 Gene3D von Willebrand factor, type A domain 324 501 IPR036465 -
Lapu3g00472 754 SUPERFAMILY vWA-like 325 492 IPR036465 -
Lapu3g00472 754 Coils Coil 592 612 - -
Lapu3g00472 754 SMART VWA_4 324 504 IPR002035 -
Lapu3g00472 754 CDD vWA_interalpha_trypsin_inhibitor 323 497 - -
Lapu3g00472 754 ProSiteProfiles VWFA domain profile. 326 519 IPR002035 -
Lapu3g00472 754 Pfam von Willebrand factor type A domain 325 483 IPR002035 -
Lapu3g00472 754 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 3 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00472 Lapu-Chr3 4841537 4849803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00472 - - gmx:100777542 1316.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00472 3 4841537 4849803 Lapu3g00472 3 4841537 4849803 ECH
Lapu3g00472 3 4841537 4849803 Lapu9g00376 9 3990938 3999130 PCT