Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00464 ATGTTGGGGAAGAGGCCCCGACCAATGATCGGAAAGTTGTCGGAGTTGTTGGTCTCAAGGGGTCCTGCGGTGGCGCTTCTCGATTCCGCTGGAAGTCCAAGAGGCCCATTAGACATCACGATGCACTCTCCAAGAGGCTTCAAGAACTACCATCTCGGCGGCGTTGGTCTTGGAATTGTGGTGGCTCTTGATAAATCCTCCAACCAACCCACACACGAGGTTTTGCCCAAACACGCAGTTTGCACCTCCAATTTGAAAATCCAAGATGAGTTTGATGTGGAGGAATACACCTATGTCACACGCCATGTACCTAACAAAACATTCACTAAGGTTTACTACGATGGTGGTGAAGGTCAAATCCAGAGACATGACCACTCTAACAACAAAAACAACAACCTTGGTCGGTTCAGAAGAACCGCACCCCAACCTTTATTTGAGTCTGAATCCTTGTATCCCAAATCGCATTTTCTCAGCTCCTGCAACCTATGCGGAAAGAAACTCCATGGGAAGGACATATACATGTACAGAGGAGAGAAAGCGTTTTGTAGCCCAGAGTGTCGTTCAAGTCAAATAATGATGGATGAACGCAAAGAGAGGTGTAGGTCAGAAGCTTCAAGGTCTGTGGAAATGTCAAGTTCGCCTTATACCAGGGAGCAAATATTTTCAACTGGGATTCTTGCACTTTAG 687 0.4672 MLGKRPRPMIGKLSELLVSRGPAVALLDSAGSPRGPLDITMHSPRGFKNYHLGGVGLGIVVALDKSSNQPTHEVLPKHAVCTSNLKIQDEFDVEEYTYVTRHVPNKTFTKVYYDGGEGQIQRHDHSNNKNNNLGRFRRTAPQPLFESESLYPKSHFLSSCNLCGKKLHGKDIYMYRGEKAFCSPECRSSQIMMDERKERCRSEASRSVEMSSSPYTREQIFSTGILAL* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00464 228 ProSiteProfiles Zinc finger FLZ-type profile. 155 198 IPR007650 -
Lapu3g00464 228 PANTHER OS02G0174800 PROTEIN 1 227 IPR044604 -
Lapu3g00464 228 Pfam zinc-finger of the FCS-type, C2-C2 148 197 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00464 Lapu-Chr3 4772869 4774540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00464 - - vun:114178972 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00464 3 4772869 4774540 Lapu3g00464 3 4772869 4774540 ECH
Lapu3g00464 3 4772869 4774540 Lapu9g00369 9 3902325 3904210 PCT