Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00363 ATGACTCTGGTCGCCCTCTTCCTCACCGCCACCAAGCTCGCCGGAGCTCTTTTTACTCTCACCGTCGCCGCCAACGCCTTCTCCTACTCCCGCTTCCGAAACAAGAACCTTCGCCGATTTCGCTCCCCCATCGACGAATCCTCCGACACTCTCGCCGCCTTCAACGTCGCCGAACAGGAGTTTTTCTTTGGTTTGGCTACAGCACCGGCTCATGTTGAGGACAGGCTTGATGATGCTTGGATCCAGTTTGCTGAGGAAAAGAGTGGTAACTCCGAGGGGAAGCAGACAGCGGATGCTGTGATGGGTTCTGCTTCTGGCGACGGTGGGTCCCAGCGGGCTGCGACGTCTCCGCGGGGCAGGAAGCCTCTTAAGGTGGCTATGGAGGCCATGATTAGGGGATTTGAGAAGTACTTGGAAGTGGAAGGAAAAGAAGGGGAAGAAGAACCTCGCCCTAATGTAACTGCTTGGCATAATGTTCCACGCCCGGAGGAGAGGTTAAGATTTTGGTCTGATCCTGAAACAGAAATAAAATTGGCCAAGGATACTGGTGTTACTGTTTTTCGCATGGGAATAGATTGGACAAGAATCATGCCAGTGGAGCCAGTAAACAGCCTCAATGAATCTGTTAACTATGCTGCACTGGAAAGGTATAAGTGGATTATCAACAGGGTTCGATCATATGGAATGAAGGTGATGCTAACTCTTTTCCATCACTCACTTCCACCCTGGGCTGGAGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAGACAATGTCTCAGATTTGGTAGACTATTGGGTAACATTTAATGAGCCCCATGTCTTCTGTATGCTTACTTACTGTGCTGGAGCTTGGCCTGGAGGTCATCCTGATATGCTTGAGGTCGCAACTTCAGCACTTCCAACTGGTGTTTTTCAGCAGGCCATGCATTGGATGTCTGTTGCACACTCGAAGGCATATGACTACATCCACGAACTAAGTAACCCATCAAATCCAATAGTTGGTGTAGCACATCATGTGTCATTTATGCGGCCCTATGGTTTGTATGACATTGCTGCTGTTTCGTTGGCTAATTCATTGACTATCTTCCCATACATTGATGAAATATCTGAAAAGCTGGACTATATAGGCATAAACTACTATGGGCAGGAAGTGATTTCGGGTGCAGGCCTGAAGCTGGTGGAAAATGATGAGTATAGTGAATCTGGTCGTGGGGTATACCCTGATGGCTTATACCGCATGTTGCTTCAGTTTCATGAAAGATACAGACATCTAAAAATTCCCTTCATCATTACTGAAAATGGGGTTTCGGATGAGACAGATTTGATTCGCCGGCCATATCTCTTGGAGCATTTGCTTGCTGTTTATGCTGCCATAAACATGGGTGTACGTGTACTTGGTTACCTGTTCTGGACTATTTCTGATAACTGGGAGTGGGCCGATGGGTATGGTCCCAAGTTTGGACTTGTTGCGGTTGACAGGGCAAATAATCTCGCACGGATCCCTCGCCCCTCTTACCATCTATTTTCTAAAATTGTGAATACGGGCAAAGTTACACGTGAAGATCGTGAAAGAGCATGGGATGAACTCCAAAGAGCTGCCAAAGAGAAGAAAACAAGACCATTTTATCGGGCTGTGAATAAACACCGTTTAATGTATGCAGGTGGACTTGATGAACCTGTACAGCGACCTTATATAGATCGAGATTGGCGGTTTGGTCATTATCAGATGGAGGGGCTCCAGGATCACTTGAGCCGCTTCTCGAGATTCATTATTCGACCCTTCTCCCCCAGAAGGAAAACAAAATCTCAAGAGAAGAATGCCAAATTAATTCTTCAGCCTCTTGAAACTTAG 1887 0.4695 MTLVALFLTATKLAGALFTLTVAANAFSYSRFRNKNLRRFRSPIDESSDTLAAFNVAEQEFFFGLATAPAHVEDRLDDAWIQFAEEKSGNSEGKQTADAVMGSASGDGGSQRAATSPRGRKPLKVAMEAMIRGFEKYLEVEGKEGEEEPRPNVTAWHNVPRPEERLRFWSDPETEIKLAKDTGVTVFRMGIDWTRIMPVEPVNSLNESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVDNVSDLVDYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEVATSALPTGVFQQAMHWMSVAHSKAYDYIHELSNPSNPIVGVAHHVSFMRPYGLYDIAAVSLANSLTIFPYIDEISEKLDYIGINYYGQEVISGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYRHLKIPFIITENGVSDETDLIRRPYLLEHLLAVYAAINMGVRVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKIVNTGKVTREDRERAWDELQRAAKEKKTRPFYRAVNKHRLMYAGGLDEPVQRPYIDRDWRFGHYQMEGLQDHLSRFSRFIIRPFSPRRKTKSQEKNAKLILQPLET* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00363 628 Pfam Glycosyl hydrolase family 1 173 358 IPR001360 GO:0004553|GO:0005975
Lapu3g00363 628 Pfam Glycosyl hydrolase family 1 378 526 IPR001360 GO:0004553|GO:0005975
Lapu3g00363 628 ProSitePatterns Glycosyl hydrolases family 1 active site. 440 448 IPR018120 -
Lapu3g00363 628 Gene3D Glycosidases 136 538 - -
Lapu3g00363 628 PANTHER GLYCOSYL HYDROLASE 75 378 IPR001360 GO:0004553|GO:0005975
Lapu3g00363 628 PRINTS Glycosyl hydrolase family 1 signature 452 463 IPR001360 GO:0004553|GO:0005975
Lapu3g00363 628 PRINTS Glycosyl hydrolase family 1 signature 497 509 IPR001360 GO:0004553|GO:0005975
Lapu3g00363 628 PRINTS Glycosyl hydrolase family 1 signature 440 448 IPR001360 GO:0004553|GO:0005975
Lapu3g00363 628 PRINTS Glycosyl hydrolase family 1 signature 473 490 IPR001360 GO:0004553|GO:0005975
Lapu3g00363 628 PRINTS Glycosyl hydrolase family 1 signature 383 397 IPR001360 GO:0004553|GO:0005975
Lapu3g00363 628 MobiDBLite consensus disorder prediction 87 121 - -
Lapu3g00363 628 SUPERFAMILY (Trans)glycosidases 153 532 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00363 Lapu-Chr3 3627835 3632973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00363 6 603 Glycoside Hydrolase AT3G06510 64.006 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00363 K21362 - gmx:100792401 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00363 3 3627835 3632973 Lapu3g00363 3 3627835 3632973 ECH