Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00358 ATGGCAAATTTCAAGCCACTCATTCTATGCTTCTTTCTCCATGCCATTGTTGTTATGATTACAATACCAGCAAGCCACTGCAGAACCTTCCTTCCAAACAATGAAAATCTGATAGAGAGCACTTGCAAGAGGACCCCCAACTACAATCTTTGCCTTCAATCTCTCAAGGCAAGCCCTGGTAGCTCCACTGCTGATGTCTCAGGGCTGGCTCTGATCATGGTCAAAGTCATGAAAGCCAAAGCAAACGATGCCTTGAAAATAATCCATGACCTGCAAAGGGTGGGAGCAGGACCTAAGCAACGAAGAGCCTTGAGTTCATGTGCTAGTAAATACAAAGCAGTGTTGATAGCTGATGTTCCACAAGCCACTGAGGCTCTGCAGAAAGGGGACCCCAAGTTTGCTGAAGATGGAGCTAATGATGCTGCTAATGAGGCTACCTATTGTGAGAGTGATTTCTCTGGGCATTCTCCACTCACCAAACAGAACAATGCTATGCATGATGTTGCTGCTGTTACAGCTGCTATTGTTAGATTGCTGCTCTAG 543 0.4567 MANFKPLILCFFLHAIVVMITIPASHCRTFLPNNENLIESTCKRTPNYNLCLQSLKASPGSSTADVSGLALIMVKVMKAKANDALKIIHDLQRVGAGPKQRRALSSCASKYKAVLIADVPQATEALQKGDPKFAEDGANDAANEATYCESDFSGHSPLTKQNNAMHDVAAVTAAIVRLLL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00358 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 180 IPR035513 -
Lapu3g00358 180 Pfam Plant invertase/pectin methylesterase inhibitor 36 175 IPR006501 GO:0004857
Lapu3g00358 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 179 - -
Lapu3g00358 180 SMART PMEI_2 33 175 IPR006501 GO:0004857
Lapu3g00358 180 NCBIfam pectinesterase inhibitor domain 12 179 IPR006501 GO:0004857
Lapu3g00358 180 FunFam Invertase/pectin methylesterase inhibitor family protein 33 180 - -
Lapu3g00358 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 179 IPR035513 -
Lapu3g00358 180 CDD CIF_like 35 179 IPR034087 GO:0004857|GO:0043086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00358 Lapu-Chr3 3587874 3588626 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00358 - - gmx:100500640 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00358 3 3587874 3588626 Lapu3g00358 3 3587874 3588626 ECH