Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00352 ATGAACACCTCAAAAAGTGTGAAGCTTGACGATGCACCCATGCAGATGGATTCTAACAACTCTTTTGGCGGACAAGAAAAAGACAAGGAAAAAGAAGAACTCACAGAGAGTATGAACAAGCTGCATATTGAAGGATCTTCATCTGGGCCTAACTTTAGAAAAAAACCTGTCATCATTATTGTTGTGGGAATGGCAGGGAGTGGCAAAACTACACTCATGCATAGATTGGTTTGCCATACACATATGAAAAACATTCGGGGTTATGTGATGAATCTTGACCCTGCTGTCATGACACTGCCTTATGCTGCTAACATTGACATAAGAGACACTGTTAAATACAAAGAAGTCATGAAGCAGTTTAACCTCGGCCCTAATGGCGGAATTTTGACTTCCCTGAACTTGTTTGCCACCAAATTTGACGAGGTAATTTCCGTAATTGAGAGACGGGCAGATCAACTTGACTATGTTCTTGTGGACACCCCTGGTCAGATTGAAATATTTACCTGGTCTGCTTCTGGTGCTATCATTACGGAAGCTTTTGCATCCACATTTCCCACTGTAGTGACCTATGTAGTTGATACACCTCGTTCAGAAGATCCTACCACTTTCATGAGCAATATGTTGTATGCTTGTAGTATCCTCTATAAGACAAGGTTACCTCTCATCTTGACATTCAACAAAATTGATGTAGCAGCACATCAGTTTGCATTGGAGTGGATGGAGGATTTTGAGGCATTCCAAACAGCAGCGAGTTCAGATCAGTCATACACATCAACTTTAACTCAAAGCCTTTCTCTTGTGCTAGATGAATTCTACAACAATTTGAAATCAGTTGGAGTTTCTGCAGTTTCTGGTGCAGGAATGGAAGCCTTTTTTAAGACTGTCGAAGCTAGTGCAGAGGAATTCATGGAAACCTACAAGACTGATCTTGATAAAAGACGTGAAGAGAAACAACGATTGGAGGAAGACCGCAGGAGAGCAAACATGGATAAACTGAGGAGGGACATGGAGAAATCTGGGGGAGAAACTGTAGTTTTGAACACTGGTTTGAAGGACAAAGAGAAAAGTAAAAGCATGATGGACGAGGAAGATGAGGTTGAGGAAGAGGAGGAAATGGATGATGATGATGATCTGGGGATATATACGGAAGATGACGATGCCATAGATGAGGACGAAGATGAGGAGGTTGATAGATTCGGCTTCTGA 1206 0.4179 MNTSKSVKLDDAPMQMDSNNSFGGQEKDKEKEELTESMNKLHIEGSSSGPNFRKKPVIIIVVGMAGSGKTTLMHRLVCHTHMKNIRGYVMNLDPAVMTLPYAANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKIDVAAHQFALEWMEDFEAFQTAASSDQSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGAGMEAFFKTVEASAEEFMETYKTDLDKRREEKQRLEEDRRRANMDKLRRDMEKSGGETVVLNTGLKDKEKSKSMMDEEDEVEEEEEMDDDDDLGIYTEDDDAIDEDEDEEVDRFGF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00352 401 MobiDBLite consensus disorder prediction 1 22 - -
Lapu3g00352 401 CDD GPN1 57 297 IPR030230 GO:0003924
Lapu3g00352 401 PANTHER XPA-BINDING PROTEIN 1-RELATED 60 318 IPR004130 -
Lapu3g00352 401 MobiDBLite consensus disorder prediction 345 401 - -
Lapu3g00352 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 296 IPR027417 -
Lapu3g00352 401 MobiDBLite consensus disorder prediction 1 36 - -
Lapu3g00352 401 Coils Coil 303 330 - -
Lapu3g00352 401 FunFam GPN-loop GTPase 1 56 314 - -
Lapu3g00352 401 Pfam Conserved hypothetical ATP binding protein 61 299 IPR004130 -
Lapu3g00352 401 MobiDBLite consensus disorder prediction 361 401 - -
Lapu3g00352 401 Gene3D - 56 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00352 Lapu-Chr3 3544808 3548400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00352 K24104 - gmx:100797318 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00352 3 3544808 3548400 Lapu3g00352 3 3544808 3548400 ECH