Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00322 ATGGACATAGACCAGTTGCCCAAGAACGCTGCTAACTACACTGCGCTAACGCCGTTGTGGTTTCTCGAAAGAGCAGCTACGGTGCACCCTACCAGAAACTCCCTCATCCATGGATCTCGTCGCTACACCTGGCAACAGACCTATCACCGTTGCCGTCGATTCGCCTCCGCTCTTTCCAACAACTCCATCGGACCAGGAAACACTGTAGCTGTTATTGCACCCAATATTCCAGCTCTTTATGAAGCTCATTTTGGGATTCCAATGGCAGGGGCTGTGTTGAATCCTGTTAATATTAGACTAAATGCATCCACTGTAGCCTTTCTTCTTGGTCATTGCTCAGCTGCAGCTGTAATAGTTGATCAAGAGTCTTTTTCTTTGGCAGAAGAAGCTTTGAAAATATGGTCGGAGAAAGCCAAAACCTTCAACCCTCCACTGTTAATAGTCATTGGTGATGAAAATTGCGACGCTAAGTCACTTAGATATGCTGTGGGCAAAGGAGCCATTGAATACGAGGATTTTCTTCAGGGTGGTGATCCTGAATATGCATGGAAACCCCCTGAGGATGAGTGGCAGAGTATTGCTTTGGGATACACATCTGGTACCACTGCTAGTCCTAAGGGTGTGGTATTACATCACCGTGGAGCCTATCTCATGTCTCTGAGTGGAGCTCTTATTTGGGGAATGACTGAAGGTGCTGTGTATCTTTGGACACTCCCCATGTTTCATTGCAATGGTTGGTGTTACACTTGGACACTTGCAGCTCTGTTTGGTACTAACATATGCCTTCGCCAGGTAACAGCGAAGGTAGTATACCAAGCCATTGCCAAGTATAAAGTGACTCATTTTTGTGCAGCACCAGTGGTTCTTAACACAATAATCAATGCCCCACCTGAGGAAACCATACTTCCTCTCCCGCATGTTGTGCATGTGAATACAGCTGGGGCTGCTCCTCCTCCTTCTGTTCTTTCTGGCATGTCTGAACGAGGATTTCGTGTCACACACACTTATGGTCTCTCTGAAACCTATGGCCCCTCTGTCTATTGTGCCTGGAAGCCAGAATGGGAATCACTTCCTCCTCAACGCCAAGCCCAGCTCAACGCAAGACAAGGGGTTAGGTACGTTGGCTTGGAAGGCTTGGAAGTGGTGAACACAAAAACCATGCAACCTGTTCCTGCTGATGGTAAAACTGTAGGTGAGATTGTGATGCGGGGCAATTGTGTGATGAAAGGCTACTTAAAGAACCCAAAAGCTAATGAGGAGACCTTTGCAAATGGATGGTTTCATTCTGGGGATCTTGCTGTGAAGCATCCAGATGGATATATAGAAATCAAAGACAGATCAAAGGACATCATCATCTCTGGTGCTGAAAATATCAGCAGTGTGGAGGTAGAGAACGCTCTTTACTCGCATCCTGCAATACTGGAAGCAGCAGTGGTTGCAAGAGCAGACGAGAGATGGGGTGAGTCTCCTTGTGCTTTTGTGACATTAAAGCCAGGAGTGGATAGAAGTAACGAGCAACGTTTAACTGAGGATATATTAAAATTCTGCAAGGCCAATATGCCTGCTTATTGGGTTCCAAAATCCTTTGTGTTTGGACCCTTACCTAAGACAGCAACTGGGAAGATACAGAAGCATTTACTAAGGGCAAAGGCCAAAGAGATGGGACCTGTTAAGATGAGCAAGTTATAA 1689 0.4618 MDIDQLPKNAANYTALTPLWFLERAATVHPTRNSLIHGSRRYTWQQTYHRCRRFASALSNNSIGPGNTVAVIAPNIPALYEAHFGIPMAGAVLNPVNIRLNASTVAFLLGHCSAAAVIVDQESFSLAEEALKIWSEKAKTFNPPLLIVIGDENCDAKSLRYAVGKGAIEYEDFLQGGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLPMFHCNGWCYTWTLAALFGTNICLRQVTAKVVYQAIAKYKVTHFCAAPVVLNTIINAPPEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPPQRQAQLNARQGVRYVGLEGLEVVNTKTMQPVPADGKTVGEIVMRGNCVMKGYLKNPKANEETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENALYSHPAILEAAVVARADERWGESPCAFVTLKPGVDRSNEQRLTEDILKFCKANMPAYWVPKSFVFGPLPKTATGKIQKHLLRAKAKEMGPVKMSKL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00322 562 Pfam AMP-binding enzyme C-terminal domain 462 541 IPR025110 -
Lapu3g00322 562 FunFam 2,3-dihydroxybenzoate-AMP ligase 448 555 - -
Lapu3g00322 562 Gene3D - 3 448 IPR042099 -
Lapu3g00322 562 FunFam Long-chain-fatty-acid--CoA ligase FadD 3 448 - -
Lapu3g00322 562 Pfam AMP-binding enzyme 22 453 IPR000873 -
Lapu3g00322 562 PANTHER ACYL-ACTIVATING ENZYME 6 557 - -
Lapu3g00322 562 CDD ttLC_FACS_AEE21_like 13 549 - -
Lapu3g00322 562 SUPERFAMILY Acetyl-CoA synthetase-like 10 553 - -
Lapu3g00322 562 Gene3D - 449 556 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00322 Lapu-Chr3 3201575 3208549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00322 2 562 Miscellaneous Gene Families AT3G16910 75.267 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00322 K01913 - gmx:100811706 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00322 3 3201575 3208549 Lapu3g00322 3 3201575 3208549 ECH