Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00244 ATGCAACGCAATGATACTACTGAATTGGAGGAAGGAGAGGCTTTCTATTGTTATAAGGATGAAGATGATGATGATGACAACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAGCATGTTCTGGGTGATTGTCGAAAGGAATTTGAAGGAGGTGTTTTTCCTGATCGTTTGGGTGCAAAATTTGGTGACTACGGCTCCTTTTTGCCCACCTATGAACGCTCGCCTCGATTGCGATCTTGTCCAAAGGCTCCAGAAAAACCCGATAGTTTACAAAAAATTCCCAGCAATATCCACAGTGCGGCTGCAATTTATAACTCCAAAGCACCTTCAAATTCGTATCCTTTCATGAGGCTAGGTACTGCTTCCCCTAACTTTCTTCTATCTCAACATACAAGAGTACCTTCAGAGAAGAACACAGGCATTTCCTCGAATACAATAACAGGGAAGTGCAGTTTGAAAGATGGCTATGCAAATAAGTACGAAAAATTGACTGACCAAAGAACGCGGATGTTGAAATCAGAGAGCTTAGCAAAAAGGAATGCAGCAATTTACAGTGGACTTGGACTTGACGACTCTCCATCTTCCTCAACAGAAAACAGCCAAAAGGAAAGTGAAGATATGCCACATGTATCTCAAGAGATGCCTGAAGAATCTTCCACTAGCATTGTTCAGGTTATGACTTCTTTCACTATCCCTGGAGGTGTGCTAATATCACCTCTACATGACAGTTTACTCTACTTGTTTGGAAAGGGAAAAGCCCTTGGAGGCAGCAGACCCATGTCTTCTCTTAATGGTCATCAAGAGCATTATTCCATGTCTACTGATGAATCAGATTCTTTGGTTGGGGATTCACATTTGTTGAAGAAAAGGAAAGTGACAGTGGTAGACCGAAGTGAAAAGCATCATATGAATGGTAACTGTTCTGAGAATGACACGACATTTCATATGAAGAAAAGATTAGGAAATAGAACTCCAGACCCTAAGGACTTTCTGTCCAACGATCTGAGATGCACACCACTGTCCAGTTCAATTTGTGATGGTGGTGAAACAACTGAAGTCACTGGTAAGGCAATTGAAGTATCCAAGGAGGTCAATAAAAATGGTGGGAAATGTAGAATGGATTCCACTGAAGCAGTGAAGGAGGTTTCACTGGAGTCTATGTCTGATCAGGATTTTGACAAGATTGAGAAGCAAAATACAGGAAGTAGCTTTGTGAAAAAAGTTTTAGAGCATAAAATGGAAATGTCTCAGAATAACAATTCTGCTGATCGGAAGGTTCGTAGCAAGTGTAACATTTCTACAATTTCAAAAAGGATCAAGTCTGATGAAATGAAATGTAAGGTGGATCGAGATACTCAGAAGTGTGAGACTAATCAGACAAAGGTAAAATCTGAAAGCAAGAACAAGTTAAATGGTGAACAGGGACCTGGAAAAGCTGTGACTGATGCTGAAAAAGATATCATTGGTACCCGTAATCAAGCAATAGTAAATGATGGAAAGAGTACTAGCATTGGTATTGCTTCTTCTAAAATGAAAATGCATAAAATGAAACTGAAGGATAATAAGGTCAGAGATTGTGACAGAGGTTCACCGAAAAGAAAAAAATCACAACTGAAGGTTGATGGAGTACATCCAACTGATGCGTCTTCCCTTAATAAGGCTACATTAAATGCTAACCTTGACCATGTTGAAAAGAGTGCAAATAGGGTTAAAGATAAGGAAAAACCAATTGGCAATAAAGTGGTTAATCAGTTGTCAGCTGTGCCATGCGTAAAAGAGGCTCCAGGTGCATTTCCTGTTGCTGAAAATAAACCAAATTCTGAGATGGTTCTGTCATCATCAGTAGCAGTACCTCAACTTATTGAAGAAGATTGGGTTTGCTGTGACAGTTGCCAGAAATGGCGGCTTCTACCTATGGGTTTAAAGCCAGAGCATCTTCCAGAGAAATGGTTGTGTAGCATGCTGTATTGGCTGCCTGGAATGAATCAGTGTAACATCAGCGAGGATGAGACAACAAAATCACTTTATGCTTTATATCAGATGCCAATTTCCGAGGGTCAAAATAACATGCGAAGTCAAGCCACTGAACCTGAAATTGGGGTGAAATCTGTTGATACTCTACAACTTTGCCATATTAACAGAAGGTCCAGTTCTGATGTAATGCTTGATCGAGGAAGGAAGAAACATAATACTAATGAAAAGGCAAAGCCAGGAATCAATAATGACAGGCATCGGTTGTCAAATACAGTAAAGAACGCTCAAGAGTCAAATGTTAAAAAAAGAAGCTTGAATCAGTGGTCTGCAGACTCAAACCGTATGAAGAAATCTAATTCTCAAAATTTGAGCAGGTTGAACAATTTGATAGAAGAGACAAACACGCCTAAGGCAAAAGAATATGAAATGAATGGAGGTGACAGAAATCAGGTTAGTTTGAAACGTAAGATGGAGGATAATCAACATAGATCGGGAAATCCTAAGAAATCTAAGATTGAAGTTGTTTGCTATGCTGATAAACATCTGAAACCTGGCATGGAATTTAAAAAGGTGGGTCTAAACTCAAGAAATGACTTGCCAACAAAGGCTAGAGGGGAAAATACGAAGAAATATGATGATTATTGTTGGTCAGACGATAACAAGTTTGTAGTTCCAGTAAAGAAAGGAGATTGGGCGCAGTTTTCATCAGATGATGGTTCGTTAGATGCTACAAACAGTAGGCAAAGTGGTTCAATTAAGAAAAGGAAAACAAATGACTCGCAGGATAACGTGGAACATAACAAAACATTGTACTTGGAAGGTGACATGCAACGTGTTAAAGAGGGCAATGTAAATAAGAAAGAGAAGAAGTATATAGTTTTGAATACAAAGGCAAAACCAGTAACTGAAAGTGATGATGAATTTATTAAAGAAAGTGGGATAAAGCGAGTTTTCTTGTCAGACAGCAGGGACAAAATGGCTATTGGGACGGAGGAGAAAAATGATATTAATAAGGCCCACCAGCCTAGAAAACACAAAAAAAATGTTGCTTCTTACCAAGCTTTGGATTGTTTTGATCCATCCGGTGGGGATTTAGGCTCTGGAAAATTCTCATTGGCAGCAACTTCAAGTTCTTCTAAGGTTTCAGGGTCTCACAAAGCTAGAACTAACCTTCATAATGCCATCGGCTCACCAGTAGAATCTGTTACCTCATCACCTTTGAGGACCTCCGACATGGAGAAATGTATTTTGGCAGCAGGGGCGGACACATTAGAAAAAGATGATGCTAGAAAAGGTGGTTTGTCAATAAAAAATTTAGATGGCAAGGAAAAAAAGTTATCAGTAAAAAAGGAGAGAGTATCACATGACATACATCTTGCACCTGGTAATTGTGGCAGTGGTTCACATCATGAGGAGAAAATGAACAAGAGTAATCAGGAAAATGCTCTTTCCTGGCAGAAATCTGGTAAGCTTACATCATTACGGGTTAAGGAAAAGGTCGGAATTTCTGGTTCTGAGGTTAGTGGGGATAAGATGAAGGTTTTAGTATCAGATAACGATTTTTCCAAAAATGGTGTGAGTTATGAGTCAGCAGTTGATCCTAATAATCACACTTCTGGTACCGAGACAAGAAATGATGTCAAGTACAGTTTTCTGAAGTCTAAACATAAGATTGACAACCTTAGCAAGCAAAATTCCTCAAGGCATTGGTCAGATGAAACTGAAAAACAAGCTGAGCTAAAGCAAAAGGATTTTGAGAATCCAATTCTGAAAAGGGAAGCAGTATATTTGAGTTCTAGAACTGCACCCAAGTTGCAAAAAGGAGATATGTCTAATGGGCATCCAGTCCGTGCATCTGGCAACGGTGATGTTCCTAGGTTTGTGAGAAATGCAGTTGATGTTAGTTGCAAGGATGGAGTTAATAACAGTTCAGGAAGTTTAGTACCAGACAGACAGCTCAGTGGGTCAAGTCCTGTGACAACAAATTCTAGCCAAACTGGCTCTAGCATTCTGGAAGAAGCCACAAAGCTAAAGGATTCTGCAGATCATTACAAGAACTCTGGTTTTGAGTTTGAAAGTAACGAGACTTATTTTAAAGCTGCCTTGAAATTTCTACATGGAGCATCACTCATAGAAAAATCCCACAGTGAAATTAGGAAGCACGGAGAGACGAGTCAAATGCAAATTTATGCTGCTACTGCTAAACTTTTTGAATCCTGTGCCCATAAATATGAAAAACGCCAAGAAATGGCTGCAGCTGCCTTGGCCTATAAATGCATGGAGGTGGTATACATGAGATTGGTTTACAATAAGCATTCTAGCATAAACAGGGAACGTGATGAGTTAAAATCAATTCTACACACGGTTTCTCAAGGTGAATCTCCTTCATCTTCTGCATCTGATATTGATAATTTAAATAACCTGGCGGCAGTGGATAGGACTACTTTGCCAAGGGGTTCTAATACTCTTATTGCTAACAATCAAGTCTTATCTGCTCAGAATCGCCCAAATATTGTCAGGCTTCTTGATTTTACTCAAGACATAAATTTTGCAATGGAGGCTTCCAGAAAATGCAAAAGCACTTTCATGGCTGCTAATTTGAGCATGGATGAAGCACGGAACAGGGATTGCATAACTTCAATTAGGAAGGTTGTTGATTTCAGCTTCCAAGATGTAGATGAGCTTGTACATCTGGTTTTGATGGCAACAAAAGCAATAACTCGAGCTGGTCTTGGTGGTGTTAGAGATTAA 4734 0.3942 MQRNDTTELEEGEAFYCYKDEDDDDDNIDLDSLSYIDERIQHVLGDCRKEFEGGVFPDRLGAKFGDYGSFLPTYERSPRLRSCPKAPEKPDSLQKIPSNIHSAAAIYNSKAPSNSYPFMRLGTASPNFLLSQHTRVPSEKNTGISSNTITGKCSLKDGYANKYEKLTDQRTRMLKSESLAKRNAAIYSGLGLDDSPSSSTENSQKESEDMPHVSQEMPEESSTSIVQVMTSFTIPGGVLISPLHDSLLYLFGKGKALGGSRPMSSLNGHQEHYSMSTDESDSLVGDSHLLKKRKVTVVDRSEKHHMNGNCSENDTTFHMKKRLGNRTPDPKDFLSNDLRCTPLSSSICDGGETTEVTGKAIEVSKEVNKNGGKCRMDSTEAVKEVSLESMSDQDFDKIEKQNTGSSFVKKVLEHKMEMSQNNNSADRKVRSKCNISTISKRIKSDEMKCKVDRDTQKCETNQTKVKSESKNKLNGEQGPGKAVTDAEKDIIGTRNQAIVNDGKSTSIGIASSKMKMHKMKLKDNKVRDCDRGSPKRKKSQLKVDGVHPTDASSLNKATLNANLDHVEKSANRVKDKEKPIGNKVVNQLSAVPCVKEAPGAFPVAENKPNSEMVLSSSVAVPQLIEEDWVCCDSCQKWRLLPMGLKPEHLPEKWLCSMLYWLPGMNQCNISEDETTKSLYALYQMPISEGQNNMRSQATEPEIGVKSVDTLQLCHINRRSSSDVMLDRGRKKHNTNEKAKPGINNDRHRLSNTVKNAQESNVKKRSLNQWSADSNRMKKSNSQNLSRLNNLIEETNTPKAKEYEMNGGDRNQVSLKRKMEDNQHRSGNPKKSKIEVVCYADKHLKPGMEFKKVGLNSRNDLPTKARGENTKKYDDYCWSDDNKFVVPVKKGDWAQFSSDDGSLDATNSRQSGSIKKRKTNDSQDNVEHNKTLYLEGDMQRVKEGNVNKKEKKYIVLNTKAKPVTESDDEFIKESGIKRVFLSDSRDKMAIGTEEKNDINKAHQPRKHKKNVASYQALDCFDPSGGDLGSGKFSLAATSSSSKVSGSHKARTNLHNAIGSPVESVTSSPLRTSDMEKCILAAGADTLEKDDARKGGLSIKNLDGKEKKLSVKKERVSHDIHLAPGNCGSGSHHEEKMNKSNQENALSWQKSGKLTSLRVKEKVGISGSEVSGDKMKVLVSDNDFSKNGVSYESAVDPNNHTSGTETRNDVKYSFLKSKHKIDNLSKQNSSRHWSDETEKQAELKQKDFENPILKREAVYLSSRTAPKLQKGDMSNGHPVRASGNGDVPRFVRNAVDVSCKDGVNNSSGSLVPDRQLSGSSPVTTNSSQTGSSILEEATKLKDSADHYKNSGFEFESNETYFKAALKFLHGASLIEKSHSEIRKHGETSQMQIYAATAKLFESCAHKYEKRQEMAAAALAYKCMEVVYMRLVYNKHSSINRERDELKSILHTVSQGESPSSSASDIDNLNNLAAVDRTTLPRGSNTLIANNQVLSAQNRPNIVRLLDFTQDINFAMEASRKCKSTFMAANLSMDEARNRDCITSIRKVVDFSFQDVDELVHLVLMATKAITRAGLGGVRD* 1578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 898 912 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 299 330 - -
Lapu3g00244 1577 Coils Coil 556 576 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 453 483 - -
Lapu3g00244 1577 ProSiteProfiles Zinc finger CW-type profile. 622 675 IPR011124 GO:0008270
Lapu3g00244 1577 PANTHER CW-TYPE ZINC FINGER 3 1569 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 1221 1246 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 913 927 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 721 830 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 895 927 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 1300 1329 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 721 744 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 526 549 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 1262 1285 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 1188 1207 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 745 795 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 190 224 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 526 544 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 796 830 - -
Lapu3g00244 1577 Pfam CW-type Zinc Finger 628 673 IPR011124 GO:0008270
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 453 471 - -
Lapu3g00244 1577 Gene3D - 625 681 - -
Lapu3g00244 1577 MobiDBLite consensus disorder prediction 299 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00244 Lapu-Chr3 2573445 2581649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00244 - - gmx:100793863 2165.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00244 3 2573445 2581649 Lapu3g00244 3 2573445 2581649 ECH
Lapu3g00244 3 2573445 2581649 Lapu9g00141 9 1261521 1270403 PCT