Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01813 ATGAAAAGGGAAAAGTGGAAAGAGAATTGCTATAGCAATAGCAACGGCAATGGATACTATTCCGATAGGTTTGTGTGTGATTATTACGATGGAGAGGTACACAGCGAAGAACGTAGCCCTACCAAGCCTTCTTCGCTGTCTTCTTCGCCTCCTAGACTTGGATACATTGAACACCATGTTTCCAAATTCGATACCTTGGCTGGTGTCGCTATCAAGTATGGTGTTGAGGTTGCAGATGTCAAAAAGTTGAATAACCTTGTTACAGACCATCAAATGTTTGCACTTAAAACTCTCTACATTCCACTACCTGGAAGGCACCCTCCATCTCCTTGTTTATCAAATGGCTCCTGTACTCCTGGGCTTAATATTGGATTTAGGTACAGAATCTGTCATACACACCATGATCTGCTTGATTCATTCCAATCCCTGAGAATAAAGTCATCTGACCGGAAGGTCTCACCGGCCATGAGCTCTTTACAGGGTTACTATGGACTTAGAGGGTCCTCAAGTCCCTCAGAAGATAGTTACCCCAGAAACTTACCTACGTCTGAAAGACCTCTCAGTCGTCACCGGAAATCTAAAAGCTTGGTCAATGTAATTTTGGAAGAGATTATGGAAAAATCAAATGAAGCATCAGCTGCAATAACGAGGGAAGTTGACTCCAGTAAATGGAATGACAAATTTGTCCAGAGACGTCAGAAATCTGTAGCTGACTTTACCAGGATACCAGAGTTGCTTCTGAGGGAGGATAATAGCAGCACTGGTGTTCTTCCATCAAGAACTGGAAAGGGTTTAGCTCTGAGACAGAAAGCAGCTAGCCGAACCACATTGGCAATTGATTCTGAACAAAATGGTTTGAGTCCTGTGGCAATGGGTATGGGGGATGCTACACTAAATGAAGGTTCATCTAGGGTGAGGAAATCATCGAGTACTTCCTGTTTACATGAACAAGATAACAGTGGGTCCTCATCCATTTGGCCGACCTCAATGTGGAATTTGAAACCAGACTTGCAGGCCCTCTCAACTGCAGCCATTGGAAAACCAATCTTTGATGGCTTGCCCAAGCCGATAACTGGTCGAAAAAATAAAGCTGCACTTGATTAA 1104 0.4348 MKREKWKENCYSNSNGNGYYSDRFVCDYYDGEVHSEERSPTKPSSLSSSPPRLGYIEHHVSKFDTLAGVAIKYGVEVADVKKLNNLVTDHQMFALKTLYIPLPGRHPPSPCLSNGSCTPGLNIGFRYRICHTHHDLLDSFQSLRIKSSDRKVSPAMSSLQGYYGLRGSSSPSEDSYPRNLPTSERPLSRHRKSKSLVNVILEEIMEKSNEASAAITREVDSSKWNDKFVQRRQKSVADFTRIPELLLREDNSSTGVLPSRTGKGLALRQKAASRTTLAIDSEQNGLSPVAMGMGDATLNEGSSRVRKSSSTSCLHEQDNSGSSSIWPTSMWNLKPDLQALSTAAIGKPIFDGLPKPITGRKNKAALD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01813 367 MobiDBLite consensus disorder prediction 162 182 - -
Lapu2g01813 367 MobiDBLite consensus disorder prediction 301 326 - -
Lapu2g01813 367 CDD LysM 64 100 IPR018392 -
Lapu2g01813 367 SUPERFAMILY LysM domain 56 101 IPR036779 -
Lapu2g01813 367 MobiDBLite consensus disorder prediction 283 326 - -
Lapu2g01813 367 ProSiteProfiles LysM domain profile. 56 100 IPR018392 -
Lapu2g01813 367 SMART LysM_2 57 101 IPR018392 -
Lapu2g01813 367 MobiDBLite consensus disorder prediction 162 191 - -
Lapu2g01813 367 Gene3D LysM domain 43 107 IPR036779 -
Lapu2g01813 367 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 32 290 IPR045030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01813 Lapu-Chr2 31796320 31800617 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01813 - - pvu:PHAVU_003G005400g 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01813 2 31796320 31800617 Lapu2g01813 2 31796320 31800617 ECH