Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01796 ATGGGTTCCGAAGTAGAAGAACCAACAACAACAACAACGATCACACAATCCACAACACCACCGGAAACGACGTCGTCGAGTCCCCCCCGAAAAATTCATAACGACGTAACCGTTAGACCTGCGCTTCTAATCGTGCAGCCTCACTCGCTTCTCCCGAAGCCAGTGCCCCCAACCGCATCGCGCAGAAACGACGTCGTCGTTTCCGCCGCATTCGGCAAGTTCTTTCACCAGCGCCGCCACGAGCTGTCGTCCGCGATCTCGCGCGGGATCGCCACGCTGAAGCACCAAAACGACGACGCATCGAAGAAGAACAGGAATGACGGCGTGACGGAGTTCAACCTCTCGGGACTGAAGGTGTACGTGGCGGTGAGAAACGACGCGACGCTCCCGCGACGGCGGATCAGCTTCTTCTCACGCTCGAACTGCAGAGAGTGCGGCGCGGTGCGGAGCTTCTTCAGGGAGAAAGCGCTGAGGTTCGTGGAAATAAACGTGGACGTGTTCGCGGAGCGGGAGAAGGAGTTGAGGGGGAGAACGGGGAGCGCGACGGTGCCGAAGATTTTCTTCGGCGATAGGCTGATCGGAGGGCTGGTGGAGCTCAACGCGCTGCGGAAGAACGGCGGCGAGGAGTTGGAGAGGCGGCTGAAAGAGGCGGAAGGTGAGGGGCCAGCAGCGCCGGCGTACGGGTTCGACGAAGCGGCGGATGAAGCGTTGGAGGAAGCGGCGGAGGAGGTTTTGAAGGTTGTTAGGTTTTTGAGGCAGAGGTTGCCGATTCAGGATAGGGTGTTAAAAATGAAGATTGCGAGGAACTGCTTCGCCGGGAGCGAGTTGGCTGTTGAGATTGGAAAACAGTTATGCAAGAAGCACTTCATCCATCATGTTTTCGGTGAAAATGATTTTGAGGAGGGAAACCACTTCTATAGATTCATTGAGCACGAACCCTCCATCTCCAAATGCTTTAACTTCCGTGGTGCCACAAATGATAGTGAACCGAAGGCTGCAGCTGCAGTGTGTGATAGGCTTACCAAGATTATGTGTGCTATTCTTGAGTCTTATGCTTCTGAAGACAGGCAACGTGTTGATTATGTGGCCATTAGCAAAAGTGAAGAATTTCGTAGCGCCTCACTTGTCTCTGCAAAACTTTTTATTTTTGCCCTGCATCTGTGTTCACTGTCTTGGTATGTAAACATGACCCAAGATCTGCAGCGGGTGAATCTCTTGGAACTATCAGAAAACGAGACGCTTGCCTTCTTCTTAAATTTGTACAATGCCATGATCGTCCATGCTATAATAAGAGTCGGGTGTCAAGAAGGTGTAATTAATAGAAGATCCTTCTCTGATTTCCAGTACTTGATTGGAGGGCACCCTTATTCTCTTAGTACTATTAAAAATGGTATCCTCAGAAGCAATCGGAGGTCACCATACTCCTTAATCAAGCCCTTTAGCTCAGGAGACAGACGCTTAGAGCTTGCTCTTGTAAAAATGAATCCGTTAGTGCACTTTGGCCTTTGTAATGGCACGAAGTCGAGCCCAAAGGTGAGGTTTTTCTCACCCTATAGAGTTGCAGAAGAATTGAGATGCGCAGCTAGAGAGTTTTTTGAGAATGATGGAGTTGAAGTGGACTTGGAGAAGAGGACAATTCATCTCACTCCAATTTTCAAGTGGTACTCTGGGGATTTCGGACAAGAGAGAAACATGCTAAAGTGGATAACAAATTACTTGGATGCAAATAAAGCAGGTCTTTTGACACATCTCTTAGGTGATGGTGGTCACGTTAATGTCTCCTACATGACTTATGATTGGTCAATAAATTCCTGA 1815 0.4964 MGSEVEEPTTTTTITQSTTPPETTSSSPPRKIHNDVTVRPALLIVQPHSLLPKPVPPTASRRNDVVVSAAFGKFFHQRRHELSSAISRGIATLKHQNDDASKKNRNDGVTEFNLSGLKVYVAVRNDATLPRRRISFFSRSNCRECGAVRSFFREKALRFVEINVDVFAEREKELRGRTGSATVPKIFFGDRLIGGLVELNALRKNGGEELERRLKEAEGEGPAAPAYGFDEAADEALEEAAEEVLKVVRFLRQRLPIQDRVLKMKIARNCFAGSELAVEIGKQLCKKHFIHHVFGENDFEEGNHFYRFIEHEPSISKCFNFRGATNDSEPKAAAAVCDRLTKIMCAILESYASEDRQRVDYVAISKSEEFRSASLVSAKLFIFALHLCSLSWYVNMTQDLQRVNLLELSENETLAFFLNLYNAMIVHAIIRVGCQEGVINRRSFSDFQYLIGGHPYSLSTIKNGILRSNRRSPYSLIKPFSSGDRRLELALVKMNPLVHFGLCNGTKSSPKVRFFSPYRVAEELRCAAREFFENDGVEVDLEKRTIHLTPIFKWYSGDFGQERNMLKWITNYLDANKAGLLTHLLGDGGHVNVSYMTYDWSINS* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01796 604 Pfam Protein of unknown function, DUF547 407 531 IPR006869 -
Lapu2g01796 604 SUPERFAMILY Thioredoxin-like 129 216 IPR036249 -
Lapu2g01796 604 ProSiteProfiles Glutaredoxin domain profile. 122 221 - -
Lapu2g01796 604 MobiDBLite consensus disorder prediction 1 33 - -
Lapu2g01796 604 SUPERFAMILY "Winged helix" DNA-binding domain 242 326 IPR036390 -
Lapu2g01796 604 MobiDBLite consensus disorder prediction 1 32 - -
Lapu2g01796 604 Gene3D Glutaredoxin 131 218 - -
Lapu2g01796 604 SMART DEP_3 251 310 IPR000591 GO:0035556
Lapu2g01796 604 Pfam Glutaredoxin 136 193 IPR002109 -
Lapu2g01796 604 CDD DEP 251 307 - -
Lapu2g01796 604 Gene3D - 237 358 IPR036388 -
Lapu2g01796 604 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 30 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01796 Lapu-Chr2 31658261 31663642 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01796 - - pvu:PHAVU_003G007200g 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01796 2 31658261 31663642 Lapu2g01796 2 31658261 31663642 ECH