Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01772 ATGAAATCAGGTTTTAAAAATGGTTGGCCCTCTGTTGTGCGTCTCCGTCTTAGAGACAAATCGGTGACCCCCTTCTGCATATTCTCTAAAGTGAAATCAGCTGGCAACATACCAGGGAATACACCTGTCTATCTCAATGTCTATGACTTGACAACAGTAAATGGCTATATGTATTGGGCTGGTCTTGGTATTTTCCACTCAGGTGTTGAAGTTTATGGAGTAGAATATGCATTTGGAGCTCATGACTATCCAACAAGTGGTGTCTTTGAGGTTGAGCCTCGGCAGTGTCCTGGCTTTAAGTTTAGGAAGTCCATATTCATGGGAACTACTAGCTTAGATCCTTTCCAGATTAGAGAGTTCATGGAACGTCAGTCTGCAAATTACAATGGTGATACTTATCATTTGATTGTCAAGAATTGCAACCATTTCTGTGAGGATATTTGTTACAAGCTAACGGGCAATCCTATACCAAAATGGGTCAATCGTCTCGCAAGGATAGGTTCCTTTTGCAACTGCATACTCCCTGATGCTCTCAAAACTTCCACTGTTCAGCATGATCCCAACTTTCAAGGGTGTGATAGTGAGAAAAGAAGACTAAGAACTGCTTTCAGTTGCTTGTCATCAATCTCAATGCCTCAGAAGGAAGTTTCAATGTCTTCATTATTTATGCACTCTCACTATAAAGGGTGCCTACCACCATGGGAGTTAAAGAAGTCTAAAAAGGGTAGACTAAAGCAAAAGTTAGAAGACTAG 753 0.4104 MKSGFKNGWPSVVRLRLRDKSVTPFCIFSKVKSAGNIPGNTPVYLNVYDLTTVNGYMYWAGLGIFHSGVEVYGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFMGTTSLDPFQIREFMERQSANYNGDTYHLIVKNCNHFCEDICYKLTGNPIPKWVNRLARIGSFCNCILPDALKTSTVQHDPNFQGCDSEKRRLRTAFSCLSSISMPQKEVSMSSLFMHSHYKGCLPPWELKKSKKGRLKQKLED* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01772 250 Gene3D PPPDE domains 37 190 IPR042266 -
Lapu2g01772 250 SMART DUF862_2a 41 179 IPR008580 GO:0008233
Lapu2g01772 250 PANTHER DESUMOYLATING ISOPEPTIDASE 39 225 IPR008580 GO:0008233
Lapu2g01772 250 ProSiteProfiles PPPDE domain profile. 41 178 IPR008580 GO:0008233
Lapu2g01772 250 Pfam PPPDE putative peptidase domain 42 177 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01772 Lapu-Chr2 31387071 31392341 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01772 - - vra:106777543 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01772 2 31387071 31392341 Lapu2g01772 2 31387071 31392341 ECH