Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01620 ATGGCCACAGCTCAGGAAAAAGCGACGCCAAATAATCTCAGTAACAACCCAACTGCTTCTAATTCCTCCGCAGTTCCCTCTTCTTGGGCCCACCCCACTGCTGCCGATCCCCTCCGAAACAGACCCTCCGTCGCCGCCCTCATTTCCGCCGTCGATTCCTTCCCCGATCCCCCTCCCAAAACCACCTCCACCACCAAAGGTATCCCAGTCATGATGAGAGCTCAAACCTGCCACCCTTTGGATCCACTGTCAGCTGCTGAAATATCAGTGGCTGTAGCTACAGTTCGGGCTGCTGGGGCAACCCCTGAGGTGAGGGATAGCATGCGCTTTGTTGAAGTAGTCTTGGTAGAACCAGATAAGCAAGTTATTGCACTAGCAGATGCATATTTCTTTCCTCCTTTCCAGCCTTCATTGCTTCCCAGGACTAAAGGAGGACCCGTGATTCCTTCTAAACTTCCCCCAAGGAAAGCACGATTGGTTGTTTACAACAAAAGGTCAAATGAGACAAGCATATGGATTGTTGAACTCAGGGAAGTGCATGCAGCAACTCGAGGTGGTCACCACAGGGGCAAAGTTATTTCTTCTAAAGTCGTTCCAAATGTTCAGCCACCCATGGATGCTGTGGAGTATGCTGAATGTGAAGCTGTTGTGAAGGACTTCCCTCCATTTCGTGAAGCAATGAAGAGAAGAGGGATTGACGACATGGATCTTGTGATGGTGGATGCCTGGTGTGTTGGATATCATAGCGAAACAGATGCTCCTAGCCGCAGGCTTGCTAAACCATTAATCTTTTGTAGAACTGAAAGTGACTGCCCCATGGAAAATGGCTATGCTCGTCCAGTCGAAGGAATCTATATACTTGTTGACATGCAAAATATGGAAATTCTTGAGTTTGAAGATCGTAAATTGATCCCTCTTCCACCTGCTGATCCATTGAGAAATTATACTTCTGGAGAAACCCGGGGAGGAGTTGATAGAAGTGATGTAAAGCCATTACAGATTATTCAGCCTGAAGGTCCAAGTTTTCGTGTCAACGGGCACTTCATTCAGTGGCAGAAGTGGAACTTTCGTATTGGTTTTACTCCTAGAGAAGGTTTGGTTATTTATTCTGTAGCCTATATTGATGGAAGTCGAGGAAGAAGGCCAGTGGCCCACAGACTGAGTTTTGTTGAGATGGTGGTTCCTTATGGAGATCCAAACGATCCTCACTATAGGAAGAATGCTTTTGATGCAGGAGAAGATGGTCTGGGCTATGTCAAATATTTTGATGCTCACTTCACAAACTTTAATGGAGGTGTTGAAACAATAGAGAATTGTGTCTGCTTGCATGAAGAGGATCATGGTATTTTATGGAAGCATCAAGACTGGAGAACAGGTTTGGCTGAAGTTCGACGGTCTAGAAGGCTGACAGATGGAAAAATAGAAGCTGAGGTCAAGCTCACGGGAATTCTTAGTTTAGGAGCATTGCAACCAGGTGAAACTCGAAAATATGGCACAACAATTGCACCTGGATTATATGCGCCTGTCCACCAACACTTTTTTGTTGCTCGTATGGACATGGCTGTTGATTGCAAGCCTGGTGAAGCATTTAATCAGGTTGTTGAGGTGGATGTTAAAGTTGAAGAGCCAGGAAAGAATAATGTTCACAACAATGCATTTTATGCAGAGGAAAAACTGCTTAAATCAGAATTGGAAGCAATGCGTGATTGTAATCCTTTATCTGCTCGACATTGGATTGTGAGAAACACCAGGACAGTAAACCGAACGGGGCAGTTAACAGGATACAAGTTAGTACCTGGTTCAAACTGTTTACCCTTGGCTGGTTCAGAGGCCAAGTTTCTGAGGAGAGCAGCTTTCTTGAAGCACAATCTTTGGGTCACTCCTTATGTTCCCGAAGAAATGCAGCCTGGAGGAGAGTTCCCCAATCAGAATCCACGCGTTGGAGAGGGTTTGGCTACTTGGGTTCAGCAAAATAGATCACTGGAGGAAGCTGATATAGTTCTTTGGTACGTGTTTGGTGTGACACATATTCCCCGATTGGAAGACTGGCCAGTTATGCCAGTGGAACGCATTGGCTTTTTGCTTATGCCACATGGGTTTTTCAATTGTTCCCCAGCAGTAGATGTTCCCCCAAGTGCAAGTGATTTAGATGATAAGGAGAATGGGATGTCAGCTAAGCCAATTCAAAATGGGGTGATTGCCAAGGTTCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAGTGGCTCCTCAGCATCTTCGACGCCGACGGCGGCATTGTTCTCTCCCTCCCTCCGATTGCCAGCAACGACCCCATTCTATCATGGGTATGGTCTTTCATCGCTTCCCTTCAAATGGGTCAATTAAACGATAGAATTGAGGCTGCGAATGAACTTGCTTCTTTGGCTCAAGATAACGATAGGAATAAGAAGATCATAGTCGAGGAATGTGGGGTGCCTCCTTTGTTGAAGCTTTTCAAGGAAGGCACTTCCCCTCTTGCTCAAATTGCTGCTGCCAGTGCTTTGTGTCATTTGGCTAATGATTTGGATAGGGTTAGAGTGATTGTGAGTGAGCTTGGTGTGCCTGCTGTTGTGCAGGTTCTCAGTGACTCCCCCGTGAGGGTTCAGACCCTGGCTGCCAATTTGGTTGCCAGGATGGCCAAGCATGATCCCGGGGCACAAGAGGATTTCGCCCGGGAGAATGCGATTAGACCGCTTGTGACACTCTTGTCGTTTGACACCTTTGTGGATGATCCATTGGGGCATTTGGGGAAGCAAAGTATTCATTCCATTGTTCAGATTAATAAGGAGTTGGGAAAGGGTAGCCGGGGAGGTCGCCATTTTGCGAATTCCTACTCGAATTCGTATTTGTTCATGGAGGGGAGTAGCCGGGGAGGGAACCATAGGAAGGAGAGGGAGAATGAGGATCCTGCGGTGAAGCTTCAGCTGAAGGTTAGTTGCGCTGAGGCGTTGTGGATGCTTGCGCGAGGAAGTGTGACCAACAGTAGGAAGATAACCGAGACCAAGGGGATGCTTTGTTTGGCTAAGATTGTTCAGAATGAGCAAGGAGAGCTGCAGTTTAATTGCTTGATGACGATAATGGAGGTAACCGCAGCTGCTGAATCCAATGCTGACCTTCGTCGAGCAGCGTTTAAGACCAATTCTCCGGCTGCTAAGACTGTTGTGGAACAGCTGCTGAGGATAATTAAAGAGGTGGATAGCCCGGCATTGCAAATTCCAGCTATGAAATCCATTGGTGCGTTGGCTAGGACGTTTCCTGCCAGAGAGACTCGAGTAATTGAACCTCTAGTGACACAGATGGGTAATAGAAATGCAGAAGTAGCAGATGAGGCAGCAGTTGCTCTTACCAAATTTGCTTCTCCTGATAATTTCCTACATGTGGAGCATTCTAAGACGATAATTGAATTCAACGGCATCCCGGCACTGATGAGACTGCTTAGGAGTAATGAAGTTACCCAGATGCATGATGGGCTAACTCTTCTTTGCTACCTTGCACTTCATGCTGGCAACAGTGAGTCCTTGGAACAAGCAAGGGTGTTGACAGTGCTAGAGGGTGCAGACAGAACAGTTCTTCCTCAGCATATAAAGGAATTGGTCTCTAGGGCAATAATCCACCTCAATTTGTATCATGCAGGAATGAATTCTCAAAGGATGTCATATTTGCCTTGA 3693 0.466 MATAQEKATPNNLSNNPTASNSSAVPSSWAHPTAADPLRNRPSVAALISAVDSFPDPPPKTTSTTKGIPVMMRAQTCHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVLVEPDKQVIALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRKARLVVYNKRSNETSIWIVELREVHAATRGGHHRGKVISSKVVPNVQPPMDAVEYAECEAVVKDFPPFREAMKRRGIDDMDLVMVDAWCVGYHSETDAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYILVDMQNMEILEFEDRKLIPLPPADPLRNYTSGETRGGVDRSDVKPLQIIQPEGPSFRVNGHFIQWQKWNFRIGFTPREGLVIYSVAYIDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGYVKYFDAHFTNFNGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLTDGKIEAEVKLTGILSLGALQPGETRKYGTTIAPGLYAPVHQHFFVARMDMAVDCKPGEAFNQVVEVDVKVEEPGKNNVHNNAFYAEEKLLKSELEAMRDCNPLSARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTPYVPEEMQPGGEFPNQNPRVGEGLATWVQQNRSLEEADIVLWYVFGVTHIPRLEDWPVMPVERIGFLLMPHGFFNCSPAVDVPPSASDLDDKENGMSAKPIQNGVIAKVHSSVVEHLTADQEWLLSIFDADGGIVLSLPPIASNDPILSWVWSFIASLQMGQLNDRIEAANELASLAQDNDRNKKIIVEECGVPPLLKLFKEGTSPLAQIAAASALCHLANDLDRVRVIVSELGVPAVVQVLSDSPVRVQTLAANLVARMAKHDPGAQEDFARENAIRPLVTLLSFDTFVDDPLGHLGKQSIHSIVQINKELGKGSRGGRHFANSYSNSYLFMEGSSRGGNHRKERENEDPAVKLQLKVSCAEALWMLARGSVTNSRKITETKGMLCLAKIVQNEQGELQFNCLMTIMEVTAAAESNADLRRAAFKTNSPAAKTVVEQLLRIIKEVDSPALQIPAMKSIGALARTFPARETRVIEPLVTQMGNRNAEVADEAAVALTKFASPDNFLHVEHSKTIIEFNGIPALMRLLRSNEVTQMHDGLTLLCYLALHAGNSESLEQARVLTVLEGADRTVLPQHIKELVSRAIIHLNLYHAGMNSQRMSYLP* 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01620 1230 MobiDBLite consensus disorder prediction 1 37 - -
Lapu2g01620 1230 SMART arm_5 806 848 IPR000225 GO:0005515
Lapu2g01620 1230 SMART arm_5 849 889 IPR000225 GO:0005515
Lapu2g01620 1230 SMART arm_5 1088 1128 IPR000225 GO:0005515
Lapu2g01620 1230 SMART arm_5 1134 1174 IPR000225 GO:0005515
Lapu2g01620 1230 Pfam Copper amine oxidase, N2 domain 78 165 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lapu2g01620 1230 FunFam Amine oxidase 62 205 - -
Lapu2g01620 1230 SUPERFAMILY ARM repeat 788 1191 IPR016024 -
Lapu2g01620 1230 Pfam Copper amine oxidase, N3 domain 203 306 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lapu2g01620 1230 MobiDBLite consensus disorder prediction 1 29 - -
Lapu2g01620 1230 Gene3D - 208 311 - -
Lapu2g01620 1230 Gene3D Copper amine oxidase, catalytic domain 319 711 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lapu2g01620 1230 SUPERFAMILY Amine oxidase catalytic domain 326 711 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lapu2g01620 1230 FunFam Amine oxidase 208 311 - -
Lapu2g01620 1230 Gene3D - 63 205 - -
Lapu2g01620 1230 Gene3D - 973 1208 IPR011989 -
Lapu2g01620 1230 Gene3D - 781 941 IPR011989 -
Lapu2g01620 1230 Coils Coil 787 807 - -
Lapu2g01620 1230 SUPERFAMILY Amine oxidase N-terminal region 202 319 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lapu2g01620 1230 PANTHER COPPER AMINE OXIDASE 73 720 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lapu2g01620 1230 FunFam Amine oxidase 322 713 - -
Lapu2g01620 1230 SUPERFAMILY Amine oxidase N-terminal region 75 204 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lapu2g01620 1230 Pfam Copper amine oxidase, enzyme domain 332 706 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01620 Lapu-Chr2 29804991 29824658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01620 K00276 - gmx:100778802 1384.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01620 2 29804991 29824658 Lapu2g01620 2 29804991 29824658 ECH