Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01605 ATGGCAACGTTTGTTACTTCTTCTTCAGTTTTCCGACCACCGCTGATTCGATGCACCAACGAGCGCCGTGCGCTGTTTAACCGCATTGCTCCTGTCTATGATAACCTGAATGACTTGCTGAGCCTCGGGCAACACCGGATTTGGAAGCGAATGGCGGTGTCGTGGACCGGAGCGAAATTGGGAGACCGGGTGTTGGATGTGTGCTGCGGAAGTGGGGATTTGTCGTTTCTCTTGTCCGACAAAGTAGGCTGTGATGGCAAGGTGATTGGTCTTGATTTCTCGAAGGATCAGTTATCGATTGCTTCATTCCGGCAGCAATTGCTTTCAAAGAAGTGCTTCGCAAATATTGAGTGGGTTGAAGGTGATGCCCTTGACTTGCCATTTTTGGATGGTTGTTTTGATGCTATCACCATGGGCTATGGTCTTCGAAATGTGGTTGATAAGCATAAGGCCATGCAGGAAATTTTCCGTGTCCTAAAAACTGGCTCTACAGTGTCTATCCTGGACTTTAATAAAAACAACGAGTCACTAACATCTGCAATTACGGAATGGATGATTGACAATGTTGTTGTCCCTGTTGCCTCTGGTTATGGTTTTTCAGAGGAATACAGATACCTCAAAAGTTCAATAAGAGAGTTTTTAACAGGGAAGGAATTGGAGAAACTTGCCTTGGAAGTAGGATTTTCTGCTGCCAGACATTATGAGATCGGTGGAGGCCTCATGGGATGTTTGGTAGCTAAGCGTTAG 747 0.4592 MATFVTSSSVFRPPLIRCTNERRALFNRIAPVYDNLNDLLSLGQHRIWKRMAVSWTGAKLGDRVLDVCCGSGDLSFLLSDKVGCDGKVIGLDFSKDQLSIASFRQQLLSKKCFANIEWVEGDALDLPFLDGCFDAITMGYGLRNVVDKHKAMQEIFRVLKTGSTVSILDFNKNNESLTSAITEWMIDNVVVPVASGYGFSEEYRYLKSSIREFLTGKELEKLALEVGFSAARHYEIGGGLMGCLVAKR* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01605 248 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 13 248 IPR004033 GO:0008168
Lapu2g01605 248 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 33 48 IPR023576 GO:0008168
Lapu2g01605 248 Gene3D Vaccinia Virus protein VP39 28 248 IPR029063 -
Lapu2g01605 248 Pfam ubiE/COQ5 methyltransferase family 24 242 - -
Lapu2g01605 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 240 IPR029063 -
Lapu2g01605 248 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 11 248 IPR004033 GO:0008168
Lapu2g01605 248 CDD AdoMet_MTases 63 162 - -
Lapu2g01605 248 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 21 248 IPR032904 GO:0042372|GO:0052624
Lapu2g01605 248 PANTHER METHYLTRANSFERASE 31 230 - -
Lapu2g01605 248 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 24 247 IPR004033 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01605 Lapu-Chr2 29640981 29644965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01605 59 185 Acyl Lipid Metabolism Gene Families AT1G48600 28.346 5.28e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01605 K23095 - gmx:100789470 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01605 2 29640981 29644965 Lapu2g01605 2 29640981 29644965 ECH