Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01590 ATGGGGCTGACATTCACGAAGCTTTTCAGTCGGCTTTTCGCCAAGAAGGAAATGCGAATTCTGATGGTCGGTCTTGATGCTGCTGGTAAGACCACTATCCTCTACAAGCTCAAGCTTGGAGAGATTGTTACAACAATTCCTACCATTGGGTTCAATGTTGAGACTGTAGAATACAAGAACATCAGCTTCACCGTTTGGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCACTACTTCCAGAACACTCAGGGTCTTATTTTTGTTGTAGACAGCAATGATAGGGACAGAGTTGTCGAGGCCAGAGATGAGTTGCATAGGATGTTGAATGAGGATGAACTGAGAGAAGCAGTATTGCTTGTGTTTGCCAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATTACTGACAAGTTGGGTCTCCACTCTCTCAGACAGCGCCACTGGTACATTCAGAGCACCTGTGCAACCTCTGGGGAGGGCCTTTATGAAGGTCTGGACTGGCTTTCCAACAACATTGCCAATAAGTTCATTAGAAGTGGTAGCAAAAGTGTGTTTCTCTGGCTTAGTGCCTTTGGGAGTCTTGCGGATTGGTATTCTGGATGCAGGGGTGAACATTATCTAGCTTTTGTTTCTTGGTCCGTCCTCTTCGGAGACAACTCGAATATGTGTTCATGTAATGTGGTTTAG 702 0.4573 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELREAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKFIRSGSKSVFLWLSAFGSLADWYSGCRGEHYLAFVSWSVLFGDNSNMCSCNVV* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01590 233 SMART sar_sub_1 1 197 IPR006689 GO:0003924|GO:0005525
Lapu2g01590 233 FunFam ADP-ribosylation factor 1 1 181 - -
Lapu2g01590 233 Pfam ADP-ribosylation factor family 5 177 IPR006689 GO:0003924|GO:0005525
Lapu2g01590 233 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Lapu2g01590 233 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Lapu2g01590 233 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Lapu2g01590 233 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Lapu2g01590 233 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Lapu2g01590 233 SMART arf_sub_2 1 181 - -
Lapu2g01590 233 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 176 IPR024156 GO:0005525
Lapu2g01590 233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 180 IPR027417 -
Lapu2g01590 233 NCBIfam small GTP-binding protein domain 16 156 IPR005225 GO:0005525
Lapu2g01590 233 Gene3D - 5 189 IPR027417 -
Lapu2g01590 233 SMART rab_sub_5 18 184 - -
Lapu2g01590 233 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01590 Lapu-Chr2 29443276 29446466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01590 K07937 - fve:101306422 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01590 2 29443276 29446466 Lapu2g01590 2 29443276 29446466 ECH