Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01585 ATGTACAAATTGATTGTTCAACTATTGACCTCTCAGATGTACAAACGGTCAAATGAAGAACATGATGTAAGTAATACGAAGGTTAGAAACTGTGAGGCGGCAGAAAGCAGTTTCCAAAGCATGAGTGTTGATAATGTGGATCCATCTGGGATTTCATCATTCCAATTAGGAAATTTGAGTTGCTGCTCATTGGTTTGTAAACCAAGTGCTATTAAGACAGCCAACAGATACTTCATGCTTCATAAAGTAACTCAGTCATGGCCTTCCCCTGCCTTGTGCTTTGTGGAGAGAGTACCTGAAGATTCACAAAGTTCTCAAGTTACAGTTTTTAATTCAGGTGATGGATCCTCAAAATCAGATAACGAGTCAACCTCGTCTAAGAGCATGCGGGATGTTCATATTTCAATGCGATTAATGGAGGACTTTCTAGATCTTGCTAAAGAAAATACAGAAAAGGATTTGGAAACCTGTGGTATACTTGGGGCCTATCTTGAGAAGGGAACCCTCTATATGACTACTCTGATCATACCAAAGCAAGAATCGGCTTCCAATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTAAATGAAAGATCCCTTTATCCTGTAGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCTGTGGATCTGCACACTCAATATTCCTACCAGATGATGATTCCTGAGGCATTTGCCATTGTCTTGGCACCAAATGATAACTTAAGGAACTGTGGAGTGTTTCGTCTAGCTGACCCTGAAGGAATGAATATTCTGAAAAATTGCCACGAGACAGGATTTCATCCTCACAAAGAACCAGATAATGGCAACCCTGTGTATGAGCACTGCTCCAATGTGTACAGAAACTCTAATCTAAGGTTTGAAATCTTTGATTTGCGCTAA 921 0.3974 MYKLIVQLLTSQMYKRSNEEHDVSNTKVRNCEAAESSFQSMSVDNVDPSGISSFQLGNLSCCSLVCKPSAIKTANRYFMLHKVTQSWPSPALCFVERVPEDSQSSQVTVFNSGDGSSKSDNESTSSKSMRDVHISMRLMEDFLDLAKENTEKDLETCGILGAYLEKGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQMMIPEAFAIVLAPNDNLRNCGVFRLADPEGMNILKNCHETGFHPHKEPDNGNPVYEHCSNVYRNSNLRFEIFDLR* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01585 306 ProSiteProfiles MPN domain profile. 132 262 IPR037518 -
Lapu2g01585 306 FunFam AMSH-like ubiquitin thioesterase 2 112 306 - -
Lapu2g01585 306 MobiDBLite consensus disorder prediction 105 130 - -
Lapu2g01585 306 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 128 236 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lapu2g01585 306 SMART pad1_6 131 259 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lapu2g01585 306 PANTHER AMSH-LIKE PROTEASE 34 306 - -
Lapu2g01585 306 CDD MPN_AMSH_like 130 306 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Lapu2g01585 306 Gene3D Cytidine Deaminase, domain 2 110 306 - -
Lapu2g01585 306 SUPERFAMILY JAB1/MPN domain 132 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01585 Lapu-Chr2 29395823 29400214 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01585 K11866 - gmx:100807282 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01585 2 29395823 29400214 Lapu2g01585 2 29395823 29400214 ECH