Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01583 ATGGCAGATTCAAAATCAGGATTGAGGAAGCCAGTCTTCACCAAGGTTGAACAGCTTCGCCCAGGAACGAGTGGACACACTTTAACTGTGAAGGTGGTCAATGCTAAGATGGTGATGCAGAAAGGTCGTTCCGATGGTCCTCAATCCCGTCAAATGCGAATTGCTGAATGTTTGGTTGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGACCAAGTGGATTTGATGAAAGAGGGCTCTACTGTGATCCTGCGTAATGCGAAAATTGACATGTTCAAAGGATCAATGCGACTTGCTGTGGACAAGTGGGGCCGTGTTGAAGTCACAGAAGCTGCTAGTTTCACTGTGAAGGAAGATAATAACTTGTCTCTTATTGAGTACGAACTGGTGAATGTTGTTGTGGAATAA 414 0.442 MADSKSGLRKPVFTKVEQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQVDLMKEGSTVILRNAKIDMFKGSMRLAVDKWGRVEVTEAASFTVKEDNNLSLIEYELVNVVVE* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01583 137 CDD SoSSB_OBF 27 110 - -
Lapu2g01583 137 PANTHER OS05G0244600 PROTEIN 3 134 - -
Lapu2g01583 137 FunFam Uncharacterized protein At4g28440 23 126 - -
Lapu2g01583 137 Gene3D - 23 126 IPR012340 -
Lapu2g01583 137 SUPERFAMILY Nucleic acid-binding proteins 6 135 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01583 Lapu-Chr2 29375471 29380664 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01583 - - gmx:100499877 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01583 2 29375471 29380664 Lapu2g01583 2 29375471 29380664 ECH