Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01530 ATGGAGTGCGCGGCGAAAGGGAGCGGAGTACGGTGCGGCGGTGCTGCCACGCGTGTCTGCGCTCGCTGCGAAGCCGTCGCTTATTGTTCTCTCTCTCACCAGATTGCACACTGGAGTCGTCACAAACACGAGTGTGATAGTTTACAACAACAGATGAAGAGTGTCGAAGTCCTCAGCGATTTTCCCTTCACTTTCTCTCGCGAAGCCACGTTTCAGGGAGGTAGATGTTCATTTTTGAGCAACAGAGGTCTTCATAAAGTGGGAATGTGGACGCATGAATGCGGTTGTGGGGCGTCATCTGCTTCATTTGATTGTTTAGGGTTAAATAATGGTTGGGATCTCTCAAGTGTTTTATGTCCATGTGGACCAAACTCTCTGGTATTAGAGCAATTACATAGTTGGAGAGACTACTATAAGTGGAGAAGCATCCCACTAGACTCGCCTGTTGCTTTGCTTCTTCATTGGCCGCTTACAATATATCAAGCTGCTCGTCTTGTTGGAATTACAGCCTTGAATCCTGAAATCAGTGAAAAGTTGTACATACATTACCTTGGACCTGAGAAAGAGCTGCTACAACTTGTGGTGTTTGGAGAATTACTGGCACTCTTCCCTGGTGTACATATTCAAATAGAACTTGTTGGACCTGCAATTCCCCCTCAAAGAGATGGTGAGAAAATTCACATTTCCAAGTATGCTTGTTGCAATGATGATGAGTGTGAGTGCAAAATAGTGACTAGAAATACAATTTTTCGAACACAGTCTGGTTCAGCAGTGACACTACAGCTTTGGTATGGATTCTATCATGACCGTTATAGAGATATTGTTAAGGATTCCTTCCCTCACCTAATAATTGCTCCTAATGGTGGCATTGCTGCTTATTCGAGTTGGTTACCAAGTATTGAGTTAATTGAAAAGATTGATGTCCCAGCTGTTTTTACTGATTATTGTGAGGAAGCATGTCATCTTGCAGCAAGTTGCATTAAGACTGTATCTAACCGTCCTCTTAAATTGCCAGTTCAGTTAAATCCTTTCAGGCAGCCCATAGCCGTGGAAGACAGCGTGTTGTTGCTTCCCTGCTACTCCAATTGCTTTCTTTTTGGTATGTAA 1107 0.4381 MECAAKGSGVRCGGAATRVCARCEAVAYCSLSHQIAHWSRHKHECDSLQQQMKSVEVLSDFPFTFSREATFQGGRCSFLSNRGLHKVGMWTHECGCGASSASFDCLGLNNGWDLSSVLCPCGPNSLVLEQLHSWRDYYKWRSIPLDSPVALLLHWPLTIYQAARLVGITALNPEISEKLYIHYLGPEKELLQLVVFGELLALFPGVHIQIELVGPAIPPQRDGEKIHISKYACCNDDECECKIVTRNTIFRTQSGSAVTLQLWYGFYHDRYRDIVKDSFPHLIIAPNGGIAAYSSWLPSIELIEKIDVPAVFTDYCEEACHLAASCIKTVSNRPLKLPVQLNPFRQPIAVEDSVLLLPCYSNCFLFGM* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01530 368 Pfam MYND finger 11 45 IPR002893 -
Lapu2g01530 368 ProSiteProfiles Zinc finger MYND-type profile. 9 45 IPR002893 -
Lapu2g01530 368 Pfam MSS51 C-terminal domain 156 352 IPR046824 -
Lapu2g01530 368 Gene3D - 5 47 - -
Lapu2g01530 368 PANTHER ZINC ION BINDING PROTEIN 2 368 - -
Lapu2g01530 368 SUPERFAMILY HIT/MYND zinc finger-like 11 50 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01530 K24081 - gmx:100808017 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01530 2 28626122 28630190 Lapu2g01530 2 28626122 28630190 ECH