Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01524 ATGGCTCTCTCAACTCTGCCCCACCGCGCCCTCCGATCCACTCTCTCCAAGCCCTTCTCCGCCGCCATCTCTTCCCGCCCGATCTCCTCCGACGCCTCCATCACCATCGAGACCTCTGTCCCCTTCACCGCGCACAACTGCGAGGCTCCCTCACGCGCCGTCACCACATCCCCCTCCGAGCTCCTTTCCTTCTTCCGCGATATGGCCCTCATGCGCCGCATGGAGATCGCCGCTGACTCCCTCTACAAGGCCAAACTCATCCGCGGCTTCTGCCACCTCTACGATGGCCAGGAGGCCGTTGCCATCGGCATGGAGGCCGGCATCACCAGAAGAGACTGCATCATCACCGCCTACCGCGACCACTGCACCTTCCTCGGCCGCGGCGGCACGCTGCTCGAGGTGTTTGCGGAGCTGATGGGGCGCAAGGACGGGTGCTCGAAAGGAAAAGGGGGTTCGATGCACTTTTATAGGAAGGAGGGTGGGTTCTATGGTGGGCACGGGATCGTGGGGGCGCAGGTTCCGTTAGGGTGTGGTTTAGCGTTTGCGCAGAAGTATAGTAAGGATGAGACAGTGACTTTTGCCTTGTATGGTGATGGAGCTGCCAATCAGGGACAGCTTTTTGAGGCGCTTAACATTGCCGCTCTTTGGGATCTTCCTGCTATCTTGGTCTGCGAGAATAATCACTATGGGATGGGGACTGCGGAGTGGAGGGCTGCAAAGAGTCCTGCTTATTACAAGCGCGGGGATTATGTGCCTGGCTTAAAGGTAGACGGCATGGACGTTCTTGCTGTTAAGCAAGCTTGCAAATTTGCAAAAGAACATGCTTTGAAGAATGGGCCCCTTATTCTTGAAATGGATACTTATAGATACCATGGCCACTCTATGTCTGATCCTGGCAGCACATACCGCACACGTGATGAAATATCTGGTGTGAGACAGGAGCGTGATCCAATTGAGAGAGTTAGAAAGTTGTTATTGTCTCATGACATTGCTGCTGAAAAGGAGCTAAAGGACATTGAAAAAGAAGTCAGAAAAGAAGTTGACGAAGCCATTGCTAAAGCAAAGGAGAGTCCAATGCCAGACCCATCTGATTTATTTACCAACGTCTACGTTAAAGGTTTAGGAGTTGAGGCATTTGGTGTTGATAGGAAAGTAGTGAGAGCTACTTTACCATAA 1176 0.5306 MALSTLPHRALRSTLSKPFSAAISSRPISSDASITIETSVPFTAHNCEAPSRAVTTSPSELLSFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAIGMEAGITRRDCIITAYRDHCTFLGRGGTLLEVFAELMGRKDGCSKGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLLLSHDIAAEKELKDIEKEVRKEVDEAIAKAKESPMPDPSDLFTNVYVKGLGVEAFGVDRKVVRATLP* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01524 391 NCBIfam pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 59 371 IPR017597 GO:0004739|GO:0006086|GO:0043231
Lapu2g01524 391 CDD TPP_E1_PDC_ADC_BCADC 64 354 - -
Lapu2g01524 391 Gene3D - 22 386 - -
Lapu2g01524 391 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 28 373 - -
Lapu2g01524 391 MobiDBLite consensus disorder prediction 294 313 - -
Lapu2g01524 391 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 48 372 IPR029061 -
Lapu2g01524 391 FunFam Pyruvate dehydrogenase E1 component subunit alpha 24 384 - -
Lapu2g01524 391 Pfam Dehydrogenase E1 component 67 362 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01524 Lapu-Chr2 28551312 28558595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01524 1 391 Acyl Lipid Metabolism Gene Families AT1G24180 79.494 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01524 K00161 - gmx:100816737 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01524 2 28551312 28558595 Lapu2g01524 2 28551312 28558595 ECH