Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01509 ATGGACCAGTCACCATTCATCACTCCCAGAGGATCTTTATCATCAAGCATTGGAGATGCTGCAGAGCTTGAGGCCAATCTCACACTCAGTGATAAGCTCAAGATTTTCAAAAGCTCCTCCTTTGATCCCAATAACTATGTCGCCTCCAAATCCCGCAGCATGAACGAAAAGGAGATAAGACACTTGTGCGCTTATCTTATTGACCTGAAGAAAGCTTCAGCAGAAGAAATGCGTAAAAGCGTTCTTGCTAACTACTCGGCCTTCATACGTACGTCCAAAGAGATATCTGATCTTGAGGGAGAGTTGCTTTCCATGAGAAATCTTCTATCCACCCAGGCTGCTTTGGTTCATGGTTTAGCAGAAGGGTGCGAGCTTAGTCCCATGATGAGTGGAAATGAAGATTCAGACATGGATGACATACTAGATGAAAAAACAGAATTATCCAAGACAGAAAAATGGCTAATAGGGTATTTAGAAACCCTTGATGTTCTATTAGCGGAGAAAAGAGTGGATGAAGCTATGACTGCTTTGGACGAAGGAGAAAAAATGGTAAAAGAAATCAGTGAAGGGGGAACTTTAAGTTCAAGTTTATTTGAGGCATTGCAGGATGCTATTGCTGAACACAGACAAAAACTAGCTGATCAACTAGCAGAAACTATCTGTCAACCATCAACTCGCAGTGCAGAGATTCGATCAACAGCATTGTCATTGAAAAAACTTGGGGATGGTCCTCGTGCTCATACATTACTACTAAGTTCTCGCCAAGAAACATTACAACGTAGCATAAAAATCCTTCAATCCAGCACTTACGGTGGTGTTGGGACATTTACTGCTACCATTTCACAGCTTGTTTTTTCCACCATTTCACAAGCGGCATCTGATTCTTTGTCGGTGTTTGCTGAAGAAGAACCTGCATATACGTCTGAGCTAGTAACTTGGGCAGTTGCACAGGCTGAGAAATTTGCTCTTCTTCTTAAGAAATGCATTCTTGCCTCTACAGCTGCCGCAGGAGGTTTGAGAGTTGCATCTGAATGTGTTCATGTGTGCATGAGTCACTGTTATCTCTTAGAGGCTAGTGGGCTAGCCCTTTCCCCTATCCTAATAAAATATTTTAGGCCATTTGTTGAGCAAGCACTGAAAACAAATTTGAAAAGAATTGAACAAAGTAGTTCTGCACTGGCTGCTGCAGAAGATTGGGTACTTGCTTATACACCAACCAGCAGCAGGTCTTCTGGCCTACCTCCTCCTCCTTCTCATAGTAACTTAAGTTTGTTACAACCAAAGCTTTCAAACAGTGGTCACAAATTCTACTCAATGGCTCAGGAGCTATTTGAAGATGTAGGGCCTCTTGAAATACTGCAATTGGATGTTCTTGCAGTTGAAGGCCTTATACAAGCGTTCAACTTCTATGTCAACTTGCTAATAAATGCATTGCCAGGATCAGTGGTAACTGAGAACCTGGAAGGGCACAGAATTGTTAAGATTGCTGAGACTGAAGCACAGCAAATAACATTGTTGGCAAATGCAATATTACTCGCAGATGAGTTGCTTCCACGTGCTGTTGTCAAGCTTTCACTCAACACAAAAGGTGATGAATCTCAGAGAAGAGGATCAGAGAAACAACGTGAACTAAAGAAAAGGCTCCAACGTGAAGTTGATCGCCTGCGTGATAGCTTTTGTCGGCAACATGCTCTTGAACTTATCTTCACAGAAGAAGGAGAAGCGCGTCTAAATGCATTAATATATCTGGGAATGGATGGTAACTTAGAGCAGCCTGAATGGTTTCCTTCTCCGATTTTTCAGGAGATTTATGCTAAGCTTACCGAAGTGGCAAGCCTTGCAGCAGACATGTTTGTAGGAAGGGAAAGATTTGCCACTGTTTTATTGATGAGACTCGCAGAAACAGTGGTCCTGTGGCTTTCTGATGACCAAGCCTTTTGGGAAGAGGTCGAGACAGGATCAACACCTTTGGGTCCCATAGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGTCGTTACTTATCTCGTCATTTGCATCAAGCAATTAAAAATATTATTGAAAGGGCTATTAATGCTCTTGCTGCTACAGGTCTAGATCCCAACAGTGTCTTACCTGAGGATGAATGGTTTGTTGAAGTTAGTGAAATTGCTATAAAGATGTTAACCGGCAGAGCAGCCTTTGATAGTGTAGAGGAAGATATTCCTGACCCAACTTCATCTGTCCAAACATAG 2256 0.4215 MDQSPFITPRGSLSSSIGDAAELEANLTLSDKLKIFKSSSFDPNNYVASKSRSMNEKEIRHLCAYLIDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLAEGCELSPMMSGNEDSDMDDILDEKTELSKTEKWLIGYLETLDVLLAEKRVDEAMTALDEGEKMVKEISEGGTLSSSLFEALQDAIAEHRQKLADQLAETICQPSTRSAEIRSTALSLKKLGDGPRAHTLLLSSRQETLQRSIKILQSSTYGGVGTFTATISQLVFSTISQAASDSLSVFAEEEPAYTSELVTWAVAQAEKFALLLKKCILASTAAAGGLRVASECVHVCMSHCYLLEASGLALSPILIKYFRPFVEQALKTNLKRIEQSSSALAAAEDWVLAYTPTSSRSSGLPPPPSHSNLSLLQPKLSNSGHKFYSMAQELFEDVGPLEILQLDVLAVEGLIQAFNFYVNLLINALPGSVVTENLEGHRIVKIAETEAQQITLLANAILLADELLPRAVVKLSLNTKGDESQRRGSEKQRELKKRLQREVDRLRDSFCRQHALELIFTEEGEARLNALIYLGMDGNLEQPEWFPSPIFQEIYAKLTEVASLAADMFVGRERFATVLLMRLAETVVLWLSDDQAFWEEVETGSTPLGPIGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIERAINALAATGLDPNSVLPEDEWFVEVSEIAIKMLTGRAAFDSVEEDIPDPTSSVQT* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01509 751 Pfam Vps51/Vps67 36 114 - -
Lapu2g01509 751 Coils Coil 538 558 - -
Lapu2g01509 751 Coils Coil 198 218 - -
Lapu2g01509 751 FunFam Exocyst complex component EXO84B 141 264 - -
Lapu2g01509 751 SUPERFAMILY Cullin repeat-like 144 379 IPR016159 -
Lapu2g01509 751 Gene3D - 273 377 IPR042560 -
Lapu2g01509 751 Gene3D - 142 264 IPR042561 -
Lapu2g01509 751 PANTHER EXOCYST COMPLEX COMPONENT 8 25 749 IPR033961 GO:0000145|GO:0006887
Lapu2g01509 751 Pfam Exocyst component 84 C-terminal 152 363 IPR032403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01509 Lapu-Chr2 28283632 28289161 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01509 K19986 - gmx:100818886 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01509 2 28283632 28289161 Lapu2g01509 2 28283632 28289161 ECH