Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01508 ATGAAGAGGGGTAGTAAAGTAGACATTTTTGTGCTACCCAACAGGCTCACACTGCTTCAGATTTTCATGGTGGTGATGCTCTTTTACTTGCTCTTCATGAGCTTCGAAATCCCTCTCGCTTTTAGAGCCGGGTTGGGTTCCGAAAATGGCGCTGTTTTCCTCACCGACGCATTGCCCATGCCCATGCCGCTATTGCTTGAAGAACCGAACCATGGGGTACAAATTCGCGGGCCCAGGGGTTTGAAGTTGGAGAAAGTTTCCTCCTTGAGGTTCAACGGGAGCTTCTCGGAGGGTTCGGAGCTGCACAAGGTGGCGCGGCACGCGTGGGTCGCTGGGGAGAAGCTCTGGGGGGATGTGGAGAGTGGGAAAGTGAAGAGTTTTGCGAAGGCGAAGGTTGAAAACGGGTCGGACTCGTGCCCGAATTCGGTTTCGGTTTCCGGGACGGAGTTTCGGGGGAAAGGGGTTATGGTGCTGCCGTGCGGACTGACGCTCTGGTCGCACGTGACGGTGGTGGGGACGCCGCGATGGGCGCATGCGGAGAGGGACCCTAAGATAGCGGTGGTGAGGGACGGGGATGAGGCGGTGATGGTGTCGCAGTTCATGATGGAGTTGCAGGGTCTGAAGGCTGTGGACAAAGAGGAACCCCCGAGGATTCTGCATTTCAATCCGAGGTTGAGAGGGGATTGGAGTGGGAAGCCTGTGATTGAGCAGAATACTTGCTATAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGGTGGAAGTCTCGTGCGGATGAGGAAACTATTGATGGACATGTAAAATGTGAAAAGTGGATTCGTGATGACAACAATCGTTCTGAAGAGTGGAAGGCAACATGGTGGTTAAACAGATTGATAGGACGAAAAAAGAGGGTGACGGTTGATTGGCCATATCCTTTTGCAGAGGGTAAGTTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGATACCATGTTAGTGTGGATGGAAGGCATGTGACATCCTTTCCCTATCGCACGGGATTTGCTCTTGAGGATGCTACTGGACTATCCATAAATGGGGATGTTGATGTGCACTCTATATTTGCTGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCGATGGAAAGCTCCTCCTCTTCACAATGTCAATGTGGATCTTTTCATTGGTATTCTTTCTGCTGGAAATCATTTTGCTGAAAGGATGGCTGTGAGGAAGTCCTGGATGCAGCACAAGCTAATCAAATCTTCACATGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATAAATGTAGACATAAAGAAAGAAGCAGAATATTTTGGTGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCATACATTGGCTGCTAAGTATATCATGAAGTGTGACGATGACACATTTGTCAGAGTGGATTCTATTGTAAATGAAGCAAAACAAGCTCAAACTGATAGAAGTCTCTACATGGGAAACATGAATTACCACCACAGGCCTCTTCGCTACGGGAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAGTATCCTATCTATGCCAATGGTCCAGGTTACATAGTCTCAGCTGACATTGCTCAATTCATTGTATCTGAATTCGAGAAGCGCAAATTAAAATTATTTAAAATGGAGGATGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACAGCACAAGAGCAGTAGAGTATGTGCACAACTTGAAGTTCTGTCAATTTGGTTGCATTGAAGAGTACTACACTTCACATTATCAATCACCAAGACAAATGACATGCATGTGGGAAAAATTGCAACATCAAGGAAAACCACTCTGTTGCAACATGAGATGA 1932 0.4695 MKRGSKVDIFVLPNRLTLLQIFMVVMLFYLLFMSFEIPLAFRAGLGSENGAVFLTDALPMPMPLLLEEPNHGVQIRGPRGLKLEKVSSLRFNGSFSEGSELHKVARHAWVAGEKLWGDVESGKVKSFAKAKVENGSDSCPNSVSVSGTEFRGKGVMVLPCGLTLWSHVTVVGTPRWAHAERDPKIAVVRDGDEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETIDGHVKCEKWIRDDNNRSEEWKATWWLNRLIGRKKRVTVDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPTSHPSFAPQMHLELLPRWKAPPLHNVNVDLFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIHTLAAKYIMKCDDDTFVRVDSIVNEAKQAQTDRSLYMGNMNYHHRPLRYGKWAVTYEEWVEEEYPIYANGPGYIVSADIAQFIVSEFEKRKLKLFKMEDVSMGMWVEQFNSTRAVEYVHNLKFCQFGCIEEYYTSHYQSPRQMTCMWEKLQHQGKPLCCNMR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01508 643 SMART Gal_bind_lectin_2 158 363 IPR001079 GO:0030246
Lapu2g01508 643 FunFam Hydroxyproline O-galactosyltransferase GALT2 278 362 - -
Lapu2g01508 643 FunFam Hydroxyproline O-galactosyltransferase GALT4 153 271 - -
Lapu2g01508 643 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 331 592 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu2g01508 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 156 362 IPR013320 -
Lapu2g01508 643 FunFam Hydroxyproline O-galactosyltransferase 388 631 - -
Lapu2g01508 643 Gene3D - 388 636 - -
Lapu2g01508 643 Pfam Galactoside-binding lectin 155 362 IPR001079 GO:0030246
Lapu2g01508 643 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 154 364 IPR001079 GO:0030246
Lapu2g01508 643 Gene3D - 192 362 - -
Lapu2g01508 643 Pfam Galactosyltransferase 410 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu2g01508 643 CDD GLECT 158 362 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01508 Lapu-Chr2 28267268 28271388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01508 6 643 Glycosyltransferase AT1G74800 60.778 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01508 K20843 - gmx:100803219 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01508 2 28267268 28271388 Lapu2g01508 2 28267268 28271388 ECH
Lapu2g01508 2 28267268 28271388 Lapu2g01508 2 28267268 28271388 PCT