Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01500 ATGGAGTTTTTCACCAAAACCAGCGTGGTGAGGCTGCGGAGCCACCTCGACAAGTACCTCGTGGCCGGCGCCGACAGCAGCCAGGTTCACCAGAGCCGCAAGGCCTCCGGCCGGGGAGCGCGGTGGACTGTTGAGGAGATCACAGACGGAGGAACCAAAAAGGTACGCCTGAGGAGCTGCCACGGAAGGTACTTAACGGCGACGGAGGCGCCGTTTCTGCTTGGGATGACAGGGAAGAAGGTGCTCCAGACGGAGTTCGAGCCCGGCGCGGATTTCAAGCACGACTGGGAAGTGACACGCGATGGGTTCCAGGTGAAGTTGATGTGTTGGAGCGGGAAGTTCCTGCGCGCGAACGGAGGGACGCCGCCGTGGCGCAGCAGCGTGACGGTGGACGAGCCGCACAGTTCGGCGACGAAGGATTGGATTCTATGGGACGTGGAGACTGTGGAGGCGGTGGAGGAGTTGGTAGATGATTTCTGCGAGAGCACGGTTTCGTCTTTCGCTTCCGATGATGTTTCCGTTGATTCGGAGCCAGCGTCTCCGATGTCGGTTTTCGCGCTCAAGTCGCCGCCGGCGAGGCGGAACTCGAAGCTGATGCTGCAGACAATAAATTCCAACAAGTTCACAACTGGCATGGACTTCTTCCACCGCGCCAAGGCCGTGCGTCTCCGCAGCCACCACGACAAGTACCTCCTGGCTGATGAGGACGAGGAGTCGGTCACGCAAGGCCGCAATGGGTCCTCCAAGAGCGCCCGGTGGGTCGTGGAATACGTGCCCGAATACGAAAACATTATTCGCCTGAAGAGCTGTTACGGCAAGTACCTCACCGCCTCCAACCACCTCTTCCTGCTTGGCATGACGGGCCACAAGGTCCTCCAGACCCTCCCACAGAGGCTCGACTCCTCCGTCGAGTGGGAGCCCGTCAAGGACGGAGGCCGCGTCAAGCTCAAGACTCGCTACGGCAACTTCCTCCGCGCCAATGGGGGCTTGCCGCCCTGGAGAAACTCCGTCACGCACGATATTCCGCACAGGACCGCCACGCAGGACTGGATCCTCTGGGACGTCGATCTCGTCGAGATTTATGCCAACTCTCCGGCGAATAGCAGTAAACCCTCTGCTCCCCCGTTGCCGGCTTCCGACACTGTTCCAGTTCTGGCCAGCGCGCCGTTGCCCCCGCCGCCGTCCTTGTCTGCTGGCTTTACTAGGCAACAGTCGAATGATTTGAATGGTTCGTCGCCGAAGATGGAGGGGCGGATTATTTACTACCATATTGCTGAAGACAATGGAGAGGTGTTGGATGAAGGTGTACAGGGCTATTCTTTGATTTTCAAAGGAAATGGAGTTCAGGAATTGACTCGAAAGTTTGAGGAAGAGACAGGGCTAGAGGGAATCATCGTATGTAATCGGAGTCCTTTGAATGGAAAGCTTTATCCTCTTCGCTTGCAGCTTCCTCCAAACACCGTGACCATGCGGGTTGTTTTGGTTCTTCCCATGTCAAATGTGGCAAGAGACTTTGAGGCACAAGGCTTACTGTGA 1536 0.5755 MEFFTKTSVVRLRSHLDKYLVAGADSSQVHQSRKASGRGARWTVEEITDGGTKKVRLRSCHGRYLTATEAPFLLGMTGKKVLQTEFEPGADFKHDWEVTRDGFQVKLMCWSGKFLRANGGTPPWRSSVTVDEPHSSATKDWILWDVETVEAVEELVDDFCESTVSSFASDDVSVDSEPASPMSVFALKSPPARRNSKLMLQTINSNKFTTGMDFFHRAKAVRLRSHHDKYLLADEDEESVTQGRNGSSKSARWVVEYVPEYENIIRLKSCYGKYLTASNHLFLLGMTGHKVLQTLPQRLDSSVEWEPVKDGGRVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTATQDWILWDVDLVEIYANSPANSSKPSAPPLPASDTVPVLASAPLPPPPSLSAGFTRQQSNDLNGSSPKMEGRIIYYHIAEDNGEVLDEGVQGYSLIFKGNGVQELTRKFEEETGLEGIIVCNRSPLNGKLYPLRLQLPPNTVTMRVVLVLPMSNVARDFEAQGLL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01500 511 Gene3D - 5 147 - -
Lapu2g01500 511 MobiDBLite consensus disorder prediction 366 411 - -
Lapu2g01500 511 MobiDBLite consensus disorder prediction 397 411 - -
Lapu2g01500 511 FunFam BnaC05g19630D protein 5 147 - -
Lapu2g01500 511 SUPERFAMILY Actin-crosslinking proteins 216 358 IPR008999 -
Lapu2g01500 511 Gene3D - 220 339 - -
Lapu2g01500 511 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Lapu2g01500 511 Pfam Domain of unknown function (DUF569) 212 353 IPR007679 -
Lapu2g01500 511 FunFam BnaC05g19630D protein 216 356 - -
Lapu2g01500 511 SUPERFAMILY Actin-crosslinking proteins 8 147 IPR008999 -
Lapu2g01500 511 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 212 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01500 Lapu-Chr2 28187195 28195344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01500 - - gmx:100797561 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01500 2 28187195 28195344 Lapu2g01500 2 28187195 28195344 ECH
Lapu2g01500 2 28187195 28195344 Lapu2g01500 2 28187195 28195344 PCT