Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01472 ATGGCGCAAGAACAGGAGTTCAGAACAAGAACCTCACTTTCGAAGTGTGAGACCTATTTCGAAATCATACAATCTAGAAAGAAGGTACCGCAGTCATTGCAGGAGACCTTGACAGATGCATTTGCACAGATTCCAGTCTCTTCTTTTCCAGCAGTTCCTAGCGGAAAAGTGATTGAAATTCTAGCAGACACGCCCGTAGGAGAAGCAGTTAAGATTCTATCTGAAAGCAACATTTTAGCAGCACCAGTTAAAGACCCAGAGGCAGTTAGTAGTTCAGATTGGAGAGGCAGGTACCTCGGCATCATAGATTATTCAGCCGTCATTCTCTGGGTCCTGGAGAGCGCAGAACTTGCAGCAGCAGCTCTATCAGCAGGTACAGCAACAGCTGCTGGAGTTGGTGCAGGAACCGTGGGTGCTTTGGGAGCACTAGCATTGGGAGCGACAGGTCCTGTTGCAATAGCTGGACTAACTGCTGCTGCAGCAGGTGCTGCAGTGGCAGGTGGCATTGCTGCAGATAATCTGATGGCTAAAGATGCACCTCAAGCTGCTGATAACCTGGGAGAAGACTTTTACAAAGTAATACTGGAGGAAGAACCCTTCAAGTCAACAACGGTGCGATCAATACTTAAATCATATCGATGGGCACCTTTTGTTCCAGTTGCGAGAGAGAGCGCTATGTTGACTGTCTTGTTGCTTCTCTCAAAGTACAGGCTGAGAAATGTACCAGTGATAGAACCAGGTAAACCTGACATGGTAAACTTCATTACTCAGTCTGCAGTTGTCCAAGGTCTTGAGAAATGCAAAGGCAGAGATTGGTTTGACTGCATTTCAGAAAAGTGTATATCTGATCTGGGACTTCCATTTATGTCTACAGCTGAGGTTATTAGCATCCAGAGCAATGAGTTGATTCTTGAAGCTTTCAAGCAAATGAGGGATAATAAAATCGGTGGTCTTCCTGTAGTAGAGGGGCCAATGAAGAGAATTGTTGGAAACTTGAGCATACGAGACATCAGATACTTGCTGCTAACGCCTGAGATTTTCACAAATTTTAGGAAGCTGACTGTGATGGATTTCATGAACAAAATTGTCTCTTCATCCCTGCAAACTGAAAAAGTTAGCCACCAGCCTATAACATGCAAGCCTGACTCGACAATGCAGAGTGTGATTCATACTCTAGCATCTCAGTCTATTCACAGGATTCATGTGGTAGATGAACAGGATGAAGTACGTGGAGTCATTACACTGAGAGATGTTATCTCTTGTTTTGTCACTGAACCTCCTTATCATTTTGATGATTACTATGGATTTGCAGTGAAGGAGATGTTGACTCAGTGA 1335 0.4434 MAQEQEFRTRTSLSKCETYFEIIQSRKKVPQSLQETLTDAFAQIPVSSFPAVPSGKVIEILADTPVGEAVKILSESNILAAPVKDPEAVSSSDWRGRYLGIIDYSAVILWVLESAELAAAALSAGTATAAGVGAGTVGALGALALGATGPVAIAGLTAAAAGAAVAGGIAADNLMAKDAPQAADNLGEDFYKVILEEEPFKSTTVRSILKSYRWAPFVPVARESAMLTVLLLLSKYRLRNVPVIEPGKPDMVNFITQSAVVQGLEKCKGRDWFDCISEKCISDLGLPFMSTAEVISIQSNELILEAFKQMRDNKIGGLPVVEGPMKRIVGNLSIRDIRYLLLTPEIFTNFRKLTVMDFMNKIVSSSLQTEKVSHQPITCKPDSTMQSVIHTLASQSIHRIHVVDEQDEVRGVITLRDVISCFVTEPPYHFDDYYGFAVKEMLTQ* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01472 444 ProSiteProfiles CBS domain profile. 289 348 IPR000644 -
Lapu2g01472 444 SMART cbs_1 293 342 IPR000644 -
Lapu2g01472 444 SMART cbs_1 216 265 IPR000644 -
Lapu2g01472 444 SMART cbs_1 375 423 IPR000644 -
Lapu2g01472 444 SMART cbs_1 56 112 IPR000644 -
Lapu2g01472 444 ProSiteProfiles CBS domain profile. 51 117 IPR000644 -
Lapu2g01472 444 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 50 423 - -
Lapu2g01472 444 Gene3D - 278 425 IPR046342 -
Lapu2g01472 444 ProSiteProfiles CBS domain profile. 372 432 IPR000644 -
Lapu2g01472 444 SUPERFAMILY CBS-domain pair 36 262 IPR046342 -
Lapu2g01472 444 Gene3D - 34 269 IPR046342 -
Lapu2g01472 444 Pfam CBS domain 373 420 IPR000644 -
Lapu2g01472 444 Pfam CBS domain 289 341 IPR000644 -
Lapu2g01472 444 SUPERFAMILY CBS-domain pair 276 431 IPR046342 -
Lapu2g01472 444 CDD CBS_pair_SF 291 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01472 Lapu-Chr2 27802321 27804646 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01472 - - gmx:100800376 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01472 2 27802321 27804646 Lapu2g01472 2 27802321 27804646 ECH