Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01043 ATGGCGACGACACGATCCGCGCCGATCCTCAAGAACCTCCTGGCCCGCCTGAATCCGGTCCGATCCGTCACATACATGCCCCGACCGGGCGACGGCACCCCGCGGGCGGTGACGCTGATCCCAGGCGACGGAATAGGTCCTCTGGTGACCGGCGCGGTGGAGCAGGTTATGGAGGCGATGCACGCGCCGGTGTACTTCGAGAAGTATGAGGTGTACGGCGACATGAAGGCGGTGCCGGCAGAGGTTCTGGAATCGGTGAGGAAGAACAAGGTGTGTTTGAAGGGAGGGCTAGCGACGCCTATGGGCGGCGGTGTGAGCTCGCTGAACGTACAACTGAGGAAGGAGCTGGATCTCTATGCCTCGCTTGTGAACTGCTTCAATCTCCCAGGCCTTCCCACGCGCCACGAGAATGTCGACATCGTCGTCATCAGGGAGAACACCGAGGGTGAGTACTCCGGCCTCGAACACGAGGTCGTTCCCGGCGTCGTCGAAAGCCTCAAGGTAATAACAAAGTTCTGTTCAGAGCGCATTGCTAAATATGCTTTCGAGTATGCTTACCTAAATAATAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAACTTGCAGATGGTTTATTCTTGGAATCTTGTCGAGAGGTTGCCACAAGGTATCCTGGTATCAAGTACAATGAAATTATTGTAGACAACTGCTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTAACCCCCAATCTTTATGGGAATCTTGTTGCAAATACAGCGGCAGGTATTGCTGGAGGCACTGGAGTCATGCCGGGAGGTAATGTCGGGGCTGATCACGCTGTGTTCGAACAAGGTGCTTCAGCAGGAAATGTTGGTAATGAGAAAGTCGTAGAACAACAGAAAGCCAACCCAGTGGCACTCCTTCTTTCGTCGGCCATGATGCTTAGACATCTTCAGTTTCCTGCATTTGCTGACCGATTGGAAACTGCCGTTAAAAAAGTGATTTTGGAGGGTAAATATCGGACGAAGGACCTTGGAGGCACAAGCACCACACAAGAAGTTGTTGATGCTGTGATGGATGCTTTAGATTGA 1095 0.5215 MATTRSAPILKNLLARLNPVRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKYEVYGDMKAVPAEVLESVRKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATRYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNEKVVEQQKANPVALLLSSAMMLRHLQFPAFADRLETAVKKVILEGKYRTKDLGGTSTTQEVVDAVMDALD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01043 364 Pfam Isocitrate/isopropylmalate dehydrogenase 37 359 IPR024084 -
Lapu2g01043 364 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 35 363 - -
Lapu2g01043 364 NCBIfam isocitrate dehydrogenase (NAD(+)) 33 362 IPR004434 GO:0006099
Lapu2g01043 364 Gene3D Isopropylmalate Dehydrogenase 23 362 - -
Lapu2g01043 364 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 24 363 - -
Lapu2g01043 364 SMART Iso_dh_2 36 359 IPR024084 -
Lapu2g01043 364 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 34 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01043 Lapu-Chr2 10012686 10018726 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01043 K00030 - gmx:100778831 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01043 2 10012686 10018726 Lapu2g01043 2 10012686 10018726 ECH