Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01042 ATGGCTTGTCTGAGTCGCCACCACCACCGCGCCTGGCTCACTACCCAAGACATGCTCCAACGCTGCCCTCTCTCCGCCCACCACCGCCGTCTCCACGACGACGCCGACGCCGACGCCGACGCAGACCCCATTTACCTCCCCTCTCCCTCCTCCGCCTACCGCCTCTTCCCCATCTACGCCATGGGCGCCTCCGACGCCACACCCGAACCCCAATTGGACGGACCCGACCCTATCTGGAACGCCGTCAGAGACGAGGCCAAGCTCGAGGCGGAGAAGGAGCCGATTCTGAGTAGCTTCTTGTACGCTAGTATTTTGGCGCATGATTGCTTCGAGCAAGCATTGGCCTTTGTCGTCGCCAATCGTCTCCAAAACCCTACTCTCTTGGCCACTCAGCTCATGGATATTTTCTGCAATGTCATTCTGCATGACAAACCTATCCAACGATCCATTCGTCTTGATGTTCAGGCATTTAAAGATCGGGACCCTGCTTGTTTGTCGTATTGCTCCGCACTTTTGTACATGAAGGGTTATCATGCTCTGCAAGTACATCGAGTAGCCCATGCATTGTGGCACCAGGGACGCCAAGTCTTGGCTCTGGCTTTGCAAAGCCGCGTTAGTGAGGTTTTTGGAGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGAATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCATTAATGCATGGTGTAACATTAGGAGGCACAGGGAAGGAAATAGGTGATCGCCATCCCAAAGTAGGTGAAGGGGCACTAATTGGAGCTAGTGCAACCATACTTGGAAATATAAAGATTGGTGAAGGCGCAATGATAGCTGCAGGTTCCCTCGTGTTAAAAGATGTTCCTCCCCACAGCATTGCGGCAGGAATACCAGCTAAAGTTATTAGTGGTCTACCGGACCATGACCCATCTTTAACCATGAAGCATGATGCTACCAAAGATTTTTTCACACAGGTAGCTACTAACTTCAGAGATGAAACGCCCAATGGAGCTCAAAATCCAGATAGAAAGGAAGTGAACAATTGA 1080 0.5093 MACLSRHHHRAWLTTQDMLQRCPLSAHHRRLHDDADADADADPIYLPSPSSAYRLFPIYAMGASDATPEPQLDGPDPIWNAVRDEAKLEAEKEPILSSFLYASILAHDCFEQALAFVVANRLQNPTLLATQLMDIFCNVILHDKPIQRSIRLDVQAFKDRDPACLSYCSALLYMKGYHALQVHRVAHALWHQGRQVLALALQSRVSEVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIGASATILGNIKIGEGAMIAAGSLVLKDVPPHSIAAGIPAKVISGLPDHDPSLTMKHDATKDFFTQVATNFRDETPNGAQNPDRKEVNN* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01042 359 SUPERFAMILY Trimeric LpxA-like enzymes 76 326 IPR011004 -
Lapu2g01042 359 NCBIfam serine O-acetyltransferase 150 311 IPR005881 GO:0005737|GO:0006535|GO:0009001
Lapu2g01042 359 PANTHER SERINE ACETYLTRANSFERASE 73 337 - -
Lapu2g01042 359 Pfam Serine acetyltransferase, N-terminal 78 181 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lapu2g01042 359 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 271 299 IPR018357 GO:0016740
Lapu2g01042 359 Gene3D Hexapeptide repeat proteins 212 340 - -
Lapu2g01042 359 Pfam Bacterial transferase hexapeptide (six repeats) 262 295 IPR001451 -
Lapu2g01042 359 CDD LbH_SAT 209 309 IPR045304 -
Lapu2g01042 359 FunFam Serine acetyltransferase 212 333 - -
Lapu2g01042 359 Gene3D serine acetyltransferase, domain 1 60 211 IPR042122 -
Lapu2g01042 359 SMART SATase_N_2_a 78 182 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lapu2g01042 359 FunFam Serine acetyltransferase 4 63 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01042 Lapu-Chr2 9999784 10004786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g01042 56 348 Miscellaneous Gene Families AT2G17640 72.203 3.53e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01042 K00640 - gmx:100775449 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01042 2 9999784 10004786 Lapu2g01042 2 9999784 10004786 ECH