Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01041 ATGATGGACACTCACGCGGAAGATTCTGTTAGACCTGAGGAGCATTTGCATGATGAGGATCATCATTACGAAGATGGAAGCAATGGAAATATTCTAATGGAAAATGGATTGTCTGACGGCAATCAAGGTCCTGCTGATACTCAAGATCAGCTTCTAGAAATGGTTATGGACCTCAGGTTTCAGAATGACTATTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAAACAGTGTACATAGTGATTATAGTATACAGAAAGGAGTTGGTGGCTTGGAAGATGGGGACTCTGACATTGTGAAAGAACTAAAGGAAAAAATACAATTGTTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCATCCGAGGAGGCTTTGAAGCACCTTCAATCGGCATACTCTGAGGCAGAAGCAAAGGGCCAAGAGCTTTCTGAAAAGCTTGCAGAAGCTCAAAAGAAGTTGAACCAAGAAATAAAAGAGCGCGATGACAAATACTCTGAACTTGACTCCAAGTTTAATAGGCTCCACAAGCGAGCAAAACAGCGCATTCAAGAAATTCAAAAGGAAAAAGATGATCTTGAGGCCCGTTTCTCCGAGGTGAATGAAATTGCAGAGCGTGCATCGTCCCAACAGTTAGCAATGCAACAAGAATTAGAGCGTACTAGGAAGCAAGCAAATGAGGCACTGAAAGCCATGGATGGGGATAGACAACAACTAAGAACTGCAAACAACAATCTTCGAGATACCATTGAAGATCTAAAGCGTTCATTGCAACCTAAAGAGAGTGCTATTGAAGTATTGCAACAGTCACTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCACTAGTTGAGCTTTCAGCTAAGCATCAAAAGAATATAGAAAGTTTGGAGGCTCAACTTAATGATGCATTGTCCGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACTGGGGAAGCAGCACGACTCAGAGCAGCTCTGGAAAGTGTGAAAGGGGAGCTTTCTCACCTAAAAGAGGAGCATGCAAAAGAAAGGGAAAGCTGGGAGACTGCTTCACAGGCACTTAAAGCAAAACTAGAAATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCCAAAATAAGAAGTCAGCTGGAATCGGAGGTATCTGCACAAACAAGGATCCTTAATACGAGAGATGTAGAATTATTGGCTGCCAAAAAAGAGATCAGCTCTCTAGAGAAGGAATTTTCTTCATACAAGGTTCGTGCACACACACTTCTTCAAAAGAAAGATGCTGAACTGGCTGCTGCTAAAGATTCTGAGCAACTCAAAGCTCTAGAGGAAACTCTGAAAGAGGTTGAAAATGAAGTATTATCAGTAACAGAAGAAAGGGATAAAGTTCTTCAAGATCTTCAGGCTGCTATGGCTAATCATGAGAAAGAACTTGCAGAAAGGTGTCTCACAACCTCTCATTTTATGATTTTCAGAGACACAACCCTCGAAAATGTCAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGCTAATGCTCAGCACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAAATGCGAGGCAATGAAGGCTGAAAATGAAGCAACTGCTACAAAGGATAAGCAAAAGGAATTGGAAGAGCTCAAACAGCGATGTAAAAAACTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCTGATAGAATGATTGAGGAGAAAGACTATGAAATATCCAGACTTTTAGATGAAAATAAGAATCTTCGTCAGTCCCTTCAATCAAGACCACTAGTCGATCAAAATGATAATTATACATCAGCCTTGCATAAATTGGATTCAACAAATTTAAGTCCCTCAGCTGCAGAACAGCAAATTCTGCTTTTGGCTAGACAACAAGCGCAAAGAGAGGAAGAGTTAGCACAGTCACAGCGTCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAACCAACAGGAGGCAATGCTAAAAACTGAGCTTCGAAACATGGAAAGATCGAAGAAAAGGGAAGGAGTAGATATGACATATTTGAAGAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTACCAGTTATTGGAATGCTGCTTCAGTTTAGTCCCGAAGAGATACAGAAGTGTCAACAGGCATATCACAACTCAACTGAAGTTCCACCAACTCCTGCAAGTGATACTTCAGGATCTGCCCTATCACTTTTCTCAAGATTCTCATTTTCTTAA 2412 0.4059 MMDTHAEDSVRPEEHLHDEDHHYEDGSNGNILMENGLSDGNQGPADTQDQLLEMVMDLRFQNDYLKSQFEGFKNVNSVHSDYSIQKGVGGLEDGDSDIVKELKEKIQLLNKEFLEEKQTRIASEEALKHLQSAYSEAEAKGQELSEKLAEAQKKLNQEIKERDDKYSELDSKFNRLHKRAKQRIQEIQKEKDDLEARFSEVNEIAERASSQQLAMQQELERTRKQANEALKAMDGDRQQLRTANNNLRDTIEDLKRSLQPKESAIEVLQQSLAEKEQMLEDMRGLLQAAEEKRQAALVELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAARLRAALESVKGELSHLKEEHAKERESWETASQALKAKLEIAESNCIRAEVEVAKIRSQLESEVSAQTRILNTRDVELLAAKKEISSLEKEFSSYKVRAHTLLQKKDAELAAAKDSEQLKALEETLKEVENEVLSVTEERDKVLQDLQAAMANHEKELAERCLTTSHFMIFRDTTLENVKQQIRSLEIKLDSANAQHLKEKEEWGLSLQNVEETWRIKCEAMKAENEATATKDKQKELEELKQRCKKLKEEHASFHDLADRMIEEKDYEISRLLDENKNLRQSLQSRPLVDQNDNYTSALHKLDSTNLSPSAAEQQILLLARQQAQREEELAQSQRHILALQEEIEELERENRLHNQQEAMLKTELRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEIQKCQQAYHNSTEVPPTPASDTSGSALSLFSRFSFS* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01041 803 MobiDBLite consensus disorder prediction 31 46 - -
Lapu2g01041 803 Coils Coil 354 413 - -
Lapu2g01041 803 Pfam GRIP domain 731 770 IPR000237 -
Lapu2g01041 803 ProSiteProfiles GRIP domain profile. 727 774 IPR000237 -
Lapu2g01041 803 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 76 787 - -
Lapu2g01041 803 Coils Coil 678 719 - -
Lapu2g01041 803 Coils Coil 99 172 - -
Lapu2g01041 803 MobiDBLite consensus disorder prediction 1 27 - -
Lapu2g01041 803 SMART 1grip 730 774 IPR000237 -
Lapu2g01041 803 Coils Coil 617 637 - -
Lapu2g01041 803 Gene3D - 217 381 - -
Lapu2g01041 803 MobiDBLite consensus disorder prediction 1 46 - -
Lapu2g01041 803 Coils Coil 177 257 - -
Lapu2g01041 803 Coils Coil 459 500 - -
Lapu2g01041 803 Coils Coil 265 349 - -
Lapu2g01041 803 Coils Coil 432 452 - -
Lapu2g01041 803 Coils Coil 530 557 - -
Lapu2g01041 803 Coils Coil 575 612 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01041 - - gmx:100775990 1306.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01041 2 9983834 9996765 Lapu2g01041 2 9983834 9996765 ECH