Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01037 ATGGCGGTTCCTTTCAGAATGAACCACAACAAACATGGCGTGCTTGCTCGTTTGAAGACTCTCGTCAACTCTCAGAAATTTCACTCCTCTGCTCCCAAACCGGTCAAACAACCAGAGCAAGACAGACCGTCTCCAAAAGAAGACTCGGACTACTCTATTTGCCGAGATCGCATAGGCATCTCAGAATGGAAGACTTTGGATGCAGAGGAGCTTGGTGTAACTAGTTCTATGATTTCACACTCGTCTATGTTTGTCCTGAAACTTCTTCGGAGCAAAGGATTTGAGTCCTACTTAGTTGGGGGGTGTGTGAGAGATCTAATACTGAATCGAACTCCAAAAGATTTTGATGTTATCACCACAGCAAAGCTTATGGAGGTGAGAAAGCAGCTTCGTCATTCAGCTCATGCTCAAGTTGTTGGACGTCGTTTTCCAATATGCTTGGTTAATATTAAAGGTTCTCTAGTTGAGGTAACTAGTTTTGAGACCGTGGCTCGAACTTCCAATGGGAAGGAACAATTTTTGTACTCTCTGTTGCCCAAATGCAGTAACAAAAAAGACTTATTTCGCTGCAAAAACTCCTTGAGCAGAGACTTCACAATTAATAGTTTATTTTATGACCCCTTTGCCAATAAAATCTATGATTATACCAATGGAATGGAAGATTTGAGGACCTTAAAGCTAGAAACTGTCATCCCTGCTCAGTTGTCCTTCAAAGAGGATCCTGGAAGAATTCTGCGTGGCTTCAGAATTGCAGCTAGGCTAGGTTTATCATTATCAAGGGAGATTGAGGCTGCATTATGGACATATTCTTCACTAGTTAAGACCTTGGACAAGAATAAAATTATGATTGAATTGAACTATATGCTATCTTATGGAGCTGCTGAACCATCGCTGCGTTTACTTTGGAAATTCAAATTGCTTGAATTTTTACTTCCTGTACATGCAGCATATCTAGATGAACAGGCTATTGAAGAAGATTCTCTGGCTTCCAATATGTTGATGAAGTTATTCTTCCATCTAGATAAGTTGGTTGCTTGCGATCGACCTTGTGATTGCACTCTGTGGATTGGATTGCTTGCATTTCACCTGGCATTAGTAAATGATCCTCAAGATGCTCTAGTGGTGTGGGCATTTGCATCTGTTCTATATCATGGAGACTGGAAAGAAGGTGTTAAATTTGCTAAAGAACAGGCCAGAATGAGTGTTAATTTTGTACCTGAAATAAGGAAGTCTAATATATACAAATCAGATGAAGAAATTGCAGTAGCAGTTACTAAATTTGCATCTTTGGTGACACACTCGATACCTGCATTGATTGAGAAAAATAGTCTTTGTCAGTTCATGCGCATGTCTAGATACCCATATTCTCAACAATCTGGCATGGTATTTGTATCCAGGAAAGTAGGGAGAGTTGCTCATGCTATTTTCAAAATGCTGGCCAGTGGCGCTAAATTTTATAAGAGAGAAAGAAAAAATTTGAAAATAAATTATGGCATGCTTGGGAAAGGTCAACTTTCTGAGACTGGATTTGTTTTGGGCAAAATTGTTCTTGAAACTATGAGTAGTGGAATTGTTGGGGATGGGGAGGATTCTGAAGCTGGACAATGTCACCTAAAGACTAAGGGCACTGAAGAAATTGATTCATTGCAACATCCAGATCTGGTAAACCATCAAGTGGCGTCGTCAATGAATGGTGAAGGACAACTTTTATCAATTCCAAATTCAGAATGTGAGCAAGGAAAAAACAAGAAACGGAAATTGGTTGAGAATAGGTGTATTGCAAGGAAGAAAATGGGCTCAGGAAACCGTGACTTGTCTGAGAAATTTAAATTCAAGGAAAATAAAAAAGAGCAGCAGAAGCTAGTTAAGTTTAGCCAGAAGGTTGATCTGTCCATGACGAAGGACTCCACAAAGAAGAATATTTATCACAGAAAACAGCTGATAAATGATAGGAAGAAAATAACCACTGCCAATACATGTTCTCTTGACCGAGCTATGCAAATTGAGACGGATGAACACACATCTACGGCATCACAATCTGCAGTATCTGATAATCATCAGGTGATAACTAACGACTTGGACGTGGCTGCTAAAACAACAAATGAGTCAGACTTGAAGAAGGAAAAAATGCGTTTATCACTGGTTGAACTCTTTAAAAAGTGA 2163 0.3948 MAVPFRMNHNKHGVLARLKTLVNSQKFHSSAPKPVKQPEQDRPSPKEDSDYSICRDRIGISEWKTLDAEELGVTSSMISHSSMFVLKLLRSKGFESYLVGGCVRDLILNRTPKDFDVITTAKLMEVRKQLRHSAHAQVVGRRFPICLVNIKGSLVEVTSFETVARTSNGKEQFLYSLLPKCSNKKDLFRCKNSLSRDFTINSLFYDPFANKIYDYTNGMEDLRTLKLETVIPAQLSFKEDPGRILRGFRIAARLGLSLSREIEAALWTYSSLVKTLDKNKIMIELNYMLSYGAAEPSLRLLWKFKLLEFLLPVHAAYLDEQAIEEDSLASNMLMKLFFHLDKLVACDRPCDCTLWIGLLAFHLALVNDPQDALVVWAFASVLYHGDWKEGVKFAKEQARMSVNFVPEIRKSNIYKSDEEIAVAVTKFASLVTHSIPALIEKNSLCQFMRMSRYPYSQQSGMVFVSRKVGRVAHAIFKMLASGAKFYKRERKNLKINYGMLGKGQLSETGFVLGKIVLETMSSGIVGDGEDSEAGQCHLKTKGTEEIDSLQHPDLVNHQVASSMNGEGQLLSIPNSECEQGKNKKRKLVENRCIARKKMGSGNRDLSEKFKFKENKKEQQKLVKFSQKVDLSMTKDSTKKNIYHRKQLINDRKKITTANTCSLDRAMQIETDEHTSTASQSAVSDNHQVITNDLDVAAKTTNESDLKKEKMRLSLVELFKK* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01037 720 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 28 537 - -
Lapu2g01037 720 Gene3D - 227 434 - -
Lapu2g01037 720 Gene3D Beta Polymerase, domain 2 63 224 IPR043519 -
Lapu2g01037 720 Pfam Poly A polymerase head domain 97 226 IPR002646 GO:0003723|GO:0006396|GO:0016779
Lapu2g01037 720 SUPERFAMILY Nucleotidyltransferase 72 223 IPR043519 -
Lapu2g01037 720 SUPERFAMILY Poly A polymerase C-terminal region-like 227 371 - -
Lapu2g01037 720 MobiDBLite consensus disorder prediction 27 51 - -
Lapu2g01037 720 CDD NT_ClassII-CCAase 87 223 IPR002646 GO:0003723|GO:0006396|GO:0016779
Lapu2g01037 720 Pfam Probable RNA and SrmB- binding site of polymerase A 255 317 IPR032828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01037 Lapu-Chr2 9949119 9956814 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01037 - - gmx:100794882 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01037 2 9949119 9956814 Lapu2g01037 2 9949119 9956814 ECH