Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01021 ATGATGGCCAGCATAAAGCCTTTGCCGGTGGCTGTGCGTAGCTCACTGCGTTCTGGCATTTTCCTGTTCGACTTCACGCGTGTCGTCGAGGAACTAGTTTTCAATAGTCTCGATGCTCGTGCCACAAAGGTATCAGTGTTTGTTAGTATTGGGAGATGCTATTTGAAAGTAGTTGATAATGGAAGTGGAATTACTCGAGATGGACTGGAGTTGGTGGGAGAAAGATATGCAACATCAAAATTTCTTGATTTGGTTGACTTGAATGCTCTGAGTGAGAATTTCGGTTTCCGTGGGGAGGCTTTGGCTTCTATTTCTGATGTCTCTGTGCTGGAAATTGTGACAAGAACACATGGAAGGCCAAATGGATATCAAAAAGTATTGAAGGGGTGCAAGTGTTTATATCTTGGCATTGATGATGATAGAAAGGAAGTGGGCACCACAGTTGTTGTCCGAGATTTATTTTACAATCAACCAGTTCGGAGAAAGTGCATACAGTCCAGTCCCAATAAGGTACTGCAATCAATCAAGAAATGTGTAATGCGGCTTGCACTTGTGCGTCCAAGTATTTCCTTCAAAGTTCTTGATATTGAAAGGTTTGAACATCTGAACTCATGGAATACTGATAATGAGTTCCGAAACAAGAAGAGAAGCAGGTGTCAGCCATGTCCAGCTTATCTCTTGAATTTAAGTTGCCCCCGATCTATGTATGATTTGGCCTTTGAGCCATCAAAAACGTATGTTAAATTCAAGGATTGGACACCTATTCTGAACTTCATTGAGAAGGTCATCAAACAGTTCTGGGAGGAAAACATAGCTTCTGTAGAACCCTCAACTCAAGCCACATACAATGTAGAAGATCAACAAGAGAAAGCATATGTCGACATCATTTCAGAAGTATCAGATACATCAAAGTTTAGGAACCAAAATCATAAGGATTGCCTAGATCTATTCTTTTCTACTTCAGACAAGCTAATTGAAGATGACTATCATCAATCTAACAGGGAAGATGTTAGAACCTCCATTGATTACTTGGAGACCAAGATGTCCAAAGAGAAACAAAGTGAAGGAGACTTTCTTTTTCAGACTGGTTATTCTAGCAACTTATTGGATGATTCAAATGCCAAGTGTATATCCACAGTGATGAGAAGGCATAACGTTTTGCTGATGCATGATAACAACAGTTCATTGAAAGGACACAACTTTTTTGATGGTGAATTTCCGGCCATAGAAAGTTTCAATGATGATGTACCTTTTGATGCACCGAGTTCTTCACATGGAAGAAAATTTCATAAAGAAGCTGATGTGATCAGCGAAGCATTTCAAGAGGGTTTACATTATAACAACAATGGGTACTGTTATGATGTAAATATTAATGGAGATTTGCGGAAACCTTTTCTAAAGGGATGCTCTACACTAGGAAGTATCCTGCATAAGAAAGATTTCTTTGTAAATGATGAATATTATACCTTCTGTAGCAAGCAGAATACAGGGGAGGACTATAGAAGTGATAAGGATTTTAATGGTGTACCTTTTGATGCACCAAATTCTTCACATGGAAGAAAATTCCATAAAGAAGCTGATGTGATCAGTGAGTCATTTCAAGATGATTTACGTTATAACTACCAAGGGTACAGTTATGATGTAAATATTAATGGGGATCTGCAGAAACCTTTTCTAAAGGGATGCTCTACACTAGGAAGTATCCTGCATAGGAAAGATTTCTCTGTAAATGATGAATATGAACTCCAAACTGATAGCATTTGTAGCAAGCAGAATATAGGGGAGGATTATAGAAGTGGTAAGGATCTATATGTCCATCCCTATCAAGAAGTGACAAAAAAATTAAAGATGTCCAAAAATTCCGATTTTCTTGTAAGAGCATTGGCTGAAGAAAATTGTCTCCCTCCAGATTTATGCTACTCAGCATCACAAATAGGAAGTTCCGGATCAGATGATCGGTCATTAAATTTTGAATGGCATCCTCTCTACCCAAAACTCTCATCTCAAGCTCATGCACTGGGTTTTTATCATACAACTGATATTAAAGATGATCTTGAAGGAGTATCTAGATACTTTAAATGGATCCATCATAAAGAACGTTTTGATGAAAGTGAAAATGAATGCAATTTTAGCTACAATATGTCAAGGAGTACCAACCAGCATCACCGTGCATCAAGTTATGCAAATATTGGATTTAATTTTGATGTTGCTGGTAATTCTGGTGAAATATTCAACAAACTAGTTGACTGCCCTGATTTCAGTGACATATATTGTACAAAAAGGTCAGATATGTTAAACAAGGAGCCAGACTGGCTGTTGCCTGAGTCATGTGTTAAAAGCTGCAAGAGGCCTAACAAGAACAAAGGCAAAACAGATCAATTTAGAAATTCAACTTTGGAGGAAAATCATGAAAGATCTAGAAGAAGCATTTCAGCTCCTCCTTTTTATAGAAGCAAAAGGAGGTTTTTCTCTTTAAATCATCCTTCAGAAATGAAAGCCAAAAGACTGATTGACCAAGTGTACAACCCTGCTTTCAATCATGAAGACACTAGTACTTCTAAATATTCTCAGCAGTCTCCTGTTGCTTGTCACCGAAGCACTAAAGATCTCTTATTGCAAGAATTCAAAATCAATGTGAAACAAACTGCAGATGTTCTGGGTGATATGCAGGATAATGACATAACAGGGATTGAAGAATTTGAGAGTTTCAACATTAAAAACAGTGCTCCATTTGGGGAATTGATCTCTAAGGATCAAGATTCCGTAGATTATGGGACTAAGTGGAGGAATTGCTCTGTGACCTTTGCACAGGAGAATGATAAACTGGCTAATATTCAATGTCGAGACAATATACTTGACATTTCTTCTGGATTCTTGCATCTTGCTGGAGATTCATTGATTCCCGAAACTATCAGTAAGAAATGCCTTGAGGATGCTAAAGTTTTGCATCAGGTGGATAAAAAATTCATTCCAGTTGTGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGCAGATGAAAGAATCAGACTGGAAGAATTGCGTCAAAAGGTATTGTCAGGAGAAGCAAAAACAGTAACCTATCTACATGCTGAACTGGAACTGGTACTGCCAGAGATTGGTTATCAACTACTTCATTGTTACAGTGAACAGATTAAAGATTGGGGCTGGATCTGCAACATTCATGCTAAAAATTCCGAGTCCTTTCGAAGGAATTTGGATATTCTAAAACGACAAAAAACGGCCGTCACACTTATTGCGGTACCGTGTATTTTAGGGGTGAAATTAAATGATGTTGATCTTTTAGAATTTCTTCAGCAGCTTGCTGACACTGATGGATCATCAACAATGCCACCCTCTGTCATACGAGTGTTAAATTCGAAAGCATGCAGAGGTGCAATTATGTTTGGGGATTCATTGCTACCATCAGAATGTTCCCTTCTAGTTGAAGAGCTAAAGCATACATCGCTCTGTTTCCAATGTGCTCATGGGCGACCAACAACTGTTCCTCTAGTCAACTTGGAGGCACTGCATAATCAGATAGCCAAGCTTCAACTGATGAACGAGTCTTCAAGTGACGAGTGGCATGGATTACGTAAGCATAAAGTATGCGTTGAACGTGTGGCACAACGTTTAAATTCTGCTAGTGGAATTTGA 3660 0.3866 MMASIKPLPVAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSIGRCYLKVVDNGSGITRDGLELVGERYATSKFLDLVDLNALSENFGFRGEALASISDVSVLEIVTRTHGRPNGYQKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKCIQSSPNKVLQSIKKCVMRLALVRPSISFKVLDIERFEHLNSWNTDNEFRNKKRSRCQPCPAYLLNLSCPRSMYDLAFEPSKTYVKFKDWTPILNFIEKVIKQFWEENIASVEPSTQATYNVEDQQEKAYVDIISEVSDTSKFRNQNHKDCLDLFFSTSDKLIEDDYHQSNREDVRTSIDYLETKMSKEKQSEGDFLFQTGYSSNLLDDSNAKCISTVMRRHNVLLMHDNNSSLKGHNFFDGEFPAIESFNDDVPFDAPSSSHGRKFHKEADVISEAFQEGLHYNNNGYCYDVNINGDLRKPFLKGCSTLGSILHKKDFFVNDEYYTFCSKQNTGEDYRSDKDFNGVPFDAPNSSHGRKFHKEADVISESFQDDLRYNYQGYSYDVNINGDLQKPFLKGCSTLGSILHRKDFSVNDEYELQTDSICSKQNIGEDYRSGKDLYVHPYQEVTKKLKMSKNSDFLVRALAEENCLPPDLCYSASQIGSSGSDDRSLNFEWHPLYPKLSSQAHALGFYHTTDIKDDLEGVSRYFKWIHHKERFDESENECNFSYNMSRSTNQHHRASSYANIGFNFDVAGNSGEIFNKLVDCPDFSDIYCTKRSDMLNKEPDWLLPESCVKSCKRPNKNKGKTDQFRNSTLEENHERSRRSISAPPFYRSKRRFFSLNHPSEMKAKRLIDQVYNPAFNHEDTSTSKYSQQSPVACHRSTKDLLLQEFKINVKQTADVLGDMQDNDITGIEEFESFNIKNSAPFGELISKDQDSVDYGTKWRNCSVTFAQENDKLANIQCRDNILDISSGFLHLAGDSLIPETISKKCLEDAKVLHQVDKKFIPVVAGRTLAVIDQHAADERIRLEELRQKVLSGEAKTVTYLHAELELVLPEIGYQLLHCYSEQIKDWGWICNIHAKNSESFRRNLDILKRQKTAVTLIAVPCILGVKLNDVDLLEFLQQLADTDGSSTMPPSVIRVLNSKACRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQIAKLQLMNESSSDEWHGLRKHKVCVERVAQRLNSASGI* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01021 1219 Coils Coil 1175 1195 - -
Lapu2g01021 1219 Pfam MutL C terminal dimerisation domain 980 1141 IPR014790 GO:0005524|GO:0006298
Lapu2g01021 1219 SUPERFAMILY Ribosomal protein S5 domain 2-like 220 268 IPR020568 -
Lapu2g01021 1219 CDD HATPase_MutL-MLH-PMS-like 12 193 - -
Lapu2g01021 1219 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 IPR014762 -
Lapu2g01021 1219 FunFam DNA mismatch repair endonuclease MutL 2 218 - -
Lapu2g01021 1219 Gene3D - 1025 1136 IPR042121 -
Lapu2g01021 1219 Gene3D - 984 1172 IPR042120 -
Lapu2g01021 1219 FunFam MUTL protein homolog 3 1025 1136 - -
Lapu2g01021 1219 Gene3D - 3 217 IPR036890 -
Lapu2g01021 1219 SMART MutL_C_2 981 1141 IPR014790 GO:0005524|GO:0006298
Lapu2g01021 1219 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 120 - -
Lapu2g01021 1219 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 24 197 IPR036890 -
Lapu2g01021 1219 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 216 1177 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Lapu2g01021 1219 MobiDBLite consensus disorder prediction 784 810 - -
Lapu2g01021 1219 SUPERFAMILY DNA mismatch repair protein MutL 979 1172 IPR037198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g01021 Lapu-Chr2 9622795 9634733 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01021 K08739 - gmx:100788019 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01021 2 9622795 9634733 Lapu2g01021 2 9622795 9634733 ECH