Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g01004 ATGGTCATGTCCCTTGTTCTGAAGAAAGATAAAAAAATGATATGCACCACGAGGTGCCTTGACCCGCCGATTACTTTGCCGCAAGAATTGAGCTTAACATGCGAAATTTCAAAAAAGAAGATATGTAGTCTTTCTAAATTTCCCAAATTTTCACTAACTCCGGATCCAAACAATTTACACGAGAAGTCTGAGTGGGGGAAGTTTTTGAATTACCTATGTGAAAATGACAAGGTTGCTCTTATAAACTTTGAGCATTACAAGTTTTACATTCTACCTCCTGCTTTAGCTTCAACATCTAGCCCAGTCAATGTTGCATATGATACAGATAATACAGGTTCTGTAGATACTCGTCCAAGGGATTTAGATACTTCCTTAGCAGGTTCGCACTTAGAGGAATGTGGTGGACCCAGTACAACTGAATATCTTAAGTTTCCTCGAGCTGAAAGAACTTGCATCGAATTTCAATCTCAAGTCCCTGTGAAAAATTTAATACGGGTAGACCCAAGTTACCTTAATACTCTTGGCCAAGCTCATTCTGGATGGATTTTTGGTGCAATAGCTGAGCTTGTTGATAATTCCAAGGATGCCGAAGCAACTAAAATGGACATTTTTGTAGATATCATCCAGTTGAAGAAATCTGGGAAGGATGTCCCGATGCTGTCTGTTATTGATGATGGTCAAGGGATGAACCATGATGAGGTTATGAAAATGGTATCTTTTGGACATAAGCAATCTGATCAAGTTGACAAGGATCACATTGGCAAATTTGGTGTTGGATTCAAAACAGGAGCAATGAGGCTTGGGAGAGATGTTCTGGTTCTAACACAGACAACTGATTCCCGATCACTAGCTTTTCTTTCACAATCTTTGAATGAAGGCAAAGATAATATTGAAATTCCCATAGTTAGCTATTGTCGACAAGGACAACGTATGGAAGTTGACCTAAGTATGCAGTCCGAAGCTTTGGCAAAATATAATTTGAAAGCTATTAAGGATTTTTCACCATTTAACAAGTATCTTATTGGTGAAAAGGCAGCCTTGTTTGGTACGGGTACAGGAACGCAAATATACATATGGAACTTGGATGAATGGGGATCAAATTATTGTTTAGAATGGCATGATGGATTGAAAGGTGGGAGTTCTTTTCACCAAGGTGACATTGTTATCCGCAGCAAAAGGACTCGCTCTCGTCCAGGCCAGATTAGTCAAAAGGTTCCATTGGATTACTCTCTACGAGCTTATTTAGAAATTATATTCTTAGTTCCTAGAATGAAGATAAGTGTACAAGGAACATTGGTTAAAAGTCGACCCTTGTCAAAATTCCTGACTCAAACTGTTATAGAAACTGATGACATCTTGAGAAGGCCAGTTGAATTAATTCTTGGATTTAGTCAACTAGAGTGGGAGCGAGGAAATTGTGGAATGTTTTTGTATTGGCATGGTCGCTTAATTGAGGCTTACAAGAGAGTTGGTGGAATGGCACATAATGCTGATGTTGGCCGGGGAGTAATTGGTGTTGTAGATGTGACCAGTTTAATGGATGACGCGAATGGTCGGGTGTGGGTACGTAATAACAAGCAGGGATTCCAAGACTCAGAACAATATGCATATCTTGAGCAGTGGCTGGGTAGAAAAGCAGATGAATACTGGGACAATAATTTTGACTCACTTAAGTTGGACAAAGATAATTGTGTCTTCAAACCCGATCATGAATGGGTTCAATGTGACAAGTGCAGAAAGTGGAGAATATTACCTACTGATTTTGATAGTAGAAAATTACCTTTGCAATGGTTTTGTTATATGGAGCCTTTCAAAGGTCAATGTGTAGATTCTGAACAGAAGATGGCGCCTGGCATAGTTAATGTTTCCACAAAGAGGTCGGGTTATGCTTGCTTGTTGAAGGATTCCAATGATAAAAAGGTGGAAGGTGTCATGAAAAACTCTGGCACAGATTTTTTTTGCTGCAATCAGGGCGAAAAAACAAGAAGCATAAATATTCTATCTTTTATGATCTGA 2016 0.3909 MVMSLVLKKDKKMICTTRCLDPPITLPQELSLTCEISKKKICSLSKFPKFSLTPDPNNLHEKSEWGKFLNYLCENDKVALINFEHYKFYILPPALASTSSPVNVAYDTDNTGSVDTRPRDLDTSLAGSHLEECGGPSTTEYLKFPRAERTCIEFQSQVPVKNLIRVDPSYLNTLGQAHSGWIFGAIAELVDNSKDAEATKMDIFVDIIQLKKSGKDVPMLSVIDDGQGMNHDEVMKMVSFGHKQSDQVDKDHIGKFGVGFKTGAMRLGRDVLVLTQTTDSRSLAFLSQSLNEGKDNIEIPIVSYCRQGQRMEVDLSMQSEALAKYNLKAIKDFSPFNKYLIGEKAALFGTGTGTQIYIWNLDEWGSNYCLEWHDGLKGGSSFHQGDIVIRSKRTRSRPGQISQKVPLDYSLRAYLEIIFLVPRMKISVQGTLVKSRPLSKFLTQTVIETDDILRRPVELILGFSQLEWERGNCGMFLYWHGRLIEAYKRVGGMAHNADVGRGVIGVVDVTSLMDDANGRVWVRNNKQGFQDSEQYAYLEQWLGRKADEYWDNNFDSLKLDKDNCVFKPDHEWVQCDKCRKWRILPTDFDSRKLPLQWFCYMEPFKGQCVDSEQKMAPGIVNVSTKRSGYACLLKDSNDKKVEGVMKNSGTDFFCCNQGEKTRSINILSFMI* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g01004 671 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 171 344 IPR036890 -
Lapu2g01004 671 Gene3D - 172 340 IPR036890 -
Lapu2g01004 671 Pfam Morc6 ribosomal protein S5 domain 2-like 409 550 IPR041006 -
Lapu2g01004 671 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 155 627 IPR045261 GO:0016887
Lapu2g01004 671 Pfam CW-type Zinc Finger 571 613 IPR011124 GO:0008270
Lapu2g01004 671 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 184 302 - -
Lapu2g01004 671 Gene3D - 558 616 - -
Lapu2g01004 671 ProSiteProfiles Zinc finger CW-type profile. 566 616 IPR011124 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g01004 - - gmx:100782161 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g01004 2 9430971 9447083 Lapu2g01004 2 9430971 9447083 ECH